Transcript Information: S_Transcript_24875.p3


Annotated TAIR IDAT1G01770.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1446 (InterPro:IPR010839); Has 1597 Blast hits to 1509 proteins in 306 species: Archae - 4; Bacteria - 843; Metazoa - 22; Fungi - 131; Plants - 31; Viruses - 0; Other Eukaryotes - 566 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:278759-282490 | Forward length=632
E-Value1E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.603714638623
Replicate 26.5137759645996
Replicate 38.6066101723469
Condition 2: 8 Hour
Replicate 17.5146613498469
Replicate 210.866326482153
Replicate 310.353411693848
Condition 3: 24 Hour
Replicate 16.2413952830269
Replicate 27.9862955078557
Replicate 37.4465083481771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24875.p3 GENE.S_Transcript_24875~~S_Transcript_24875.p3 ORF type:5prime_partial len:105 (+),score=10.47,DUF1446|PF07287.7|7.3e-27 S_Transcript_24875:3-317(+)
ATAGTTAGATGCCTTGAATTATCCAAGCCAAATGTAATCATCACCAGCCGTGTCGCTGATGCGGCCCTATTTTTAGCTCCAATGATTTATGAACTGGGCTGGAACTGGGATGACGTGGAGCACCTTGCACAAGGAACTTTGGCAGGTCACCTTTTAGAGTGTGGTTGTCAGCTGACTGGAGGTTACTTTATGCATCCAGGTGACAACTTCAGAGACATGTCTTTTCACTGTCTTCTAGATTTATCACTTATGCTGAAGTTAGTTACCATGGAGAAGTATGTGTGGCCAAAGCTGATGGTAGTGCTGGTGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24875.p3 GENE.S_Transcript_24875~~S_Transcript_24875.p3 ORF type:5prime_partial len:105 (+),score=10.47,DUF1446|PF07287.7|7.3e-27 S_Transcript_24875:3-317(+)
IVRCLELSKPNVIITSRVADAALFLAPMIYELGWNWDDVEHLAQGTLAGHLLECGCQLTGGYFMHPGDNFRDMSFHCLLDLSLMLKLVTMEKYVWPKLMVVLVF*

Click here to download the sequence:
Link to NCBI Protein BLAST