Transcript Information: S_Transcript_248878.p1


Annotated TAIR IDAT3G14172.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4698860-4704773 | Reverse length=1270
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33059628863578
Replicate 20.82221575990738
Replicate 30.45820462319505
Condition 2: 8 Hour
Replicate 10.26491168095817
Replicate 20.55582232645284
Replicate 30.39718970692512
Condition 3: 24 Hour
Replicate 11.0854600492221
Replicate 20.9853831120151
Replicate 30.78329330450671


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_248878.p1 GENE.S_Transcript_248878~~S_Transcript_248878.p1 ORF type:internal len:161 (-),score=46.26 S_Transcript_248878:3-482(-)
AGGGATCAGCTAAGTTTTAGATCACCATTCAGGTCATCTCAGAGAACAGTCGAAGTTGCACAAGATTCAGCAGCCTCTGAAGTCCATTCGCAATCTGTGATCCTTAACAAAGACAGTGAGGCTGATTCCACATCTGAGCCTAGGTGGAAGCCTTTAGGGGCAGATATTGAAAAGGGTGGAAGGAAGGATTTTGAGACATTTGACAAGCAAGCTGAAAGTCCCTCAATGCAAATGGAGAGTTCTGGTTCATCGAGGTCTAAATTACAGGGTCATTTTTCTGAACAAATGAAGAGGCCTGGAGGAAGAAGGGAAGTGGGCGTTTCTGGTTCTGGGAGTAGCCAGCCAGGCATCACTAGGAAAAATGCACCTGAGAGTCAAGAAGCTGTTTCTTTGACATCCTCGGCTCCTGTTGATCAAGCTCAGAGGGTGAGACAGCCGAAAGCGAACCAAGGGCTGAATGACGAGTTGAAAATGAAGGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_248878.p1 GENE.S_Transcript_248878~~S_Transcript_248878.p1 ORF type:internal len:161 (-),score=46.26 S_Transcript_248878:3-482(-)
RDQLSFRSPFRSSQRTVEVAQDSAASEVHSQSVILNKDSEADSTSEPRWKPLGADIEKGGRKDFETFDKQAESPSMQMESSGSSRSKLQGHFSEQMKRPGGRREVGVSGSGSSQPGITRKNAPESQEAVSLTSSAPVDQAQRVRQPKANQGLNDELKMKA

Click here to download the sequence:
Link to NCBI Protein BLAST