Transcript Information: S_Transcript_24897.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.068855219696
Replicate 23.7420985821933
Replicate 34.6921448693259
Condition 2: 8 Hour
Replicate 12.9388347080148
Replicate 22.6087314668232
Replicate 32.4102725207046
Condition 3: 24 Hour
Replicate 12.778854436966
Replicate 23.1232814539843
Replicate 33.4758294409877


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24897.p1 GENE.S_Transcript_24897~~S_Transcript_24897.p1 ORF type:complete len:283 (+),score=25.18,zf-RING_2|PF13639.2|5.8e+03,zf-RING_2|PF13639.2|1.3e+03,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.2e+02,zf-RING_11|PF17123.1|2.5e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|9.4e+03,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|5.2e-06 S_Transcript_24897:316-1164(+)
ATGGAGGATTTTACATCTAGTAGTTGTAGCCTTAATGACAACAGACCCACAACAAACAACCATATAAGAGACTATCTAAGGACCACCTGCCCTGTTCCCCTCCCTTTTTTAAGCCCTTGCATAGACTGGAACCACTCGGAGCTCCGACCCGGATATGACTCTGATGATGGGTCGGGCTCAGATCATCATGCATATTCCAAGCCATTTGTGGTCCTTGATGTCATTTGGAATCTGGGTTTTGTTTTTGTGTCTATTTTTGTGTTATTATGTACTTTACAAGAGAAACCCACTAGCCCTTTGAGGGTTTGGATTACTGGGTACGCTTTGCAGTGCCTTTTGCATGTGGGTTTTGTTTATTTTGAGTATCACCGCAGGGTTCATGGCTCTGGTTCTTTTGAAGGTCACAGTCATAGCAGGTTAGCAGTTGTTTTCCTGGCACTTGATGTATTCTTCATGATATTCTGCATAGGGATGGCCTGTATCATTTGCCTAGCTTTCTTTTGTTGTATCCCTATTGTAGCAATTGCTTATGCCATGACAATCCGAGAAGGAGCATCTGAAGATGAGATCAGACTTCTTCCTAAATACAGGTTTCACCAGTCTTGTGTACCAAGGATATCTGCCTCTACTGAATTTGGAAGCAGGAAATCCACTAACGAACCTGCTTTTCTATTCCAAGCTTCTGAGTGTTGCATTTGCTTGACTCAGTATCTAGAGGGAGCTGAATTATGCAGCCTTCCCTGCAACCACCATTTTCATTACGGATGTATCAGCAGATGGTTGCGGATAAATGCAACTTGTCCGCTATGTAAATTTAATATCAGGGCCAAGGGTGACACTTTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24897.p1 GENE.S_Transcript_24897~~S_Transcript_24897.p1 ORF type:complete len:283 (+),score=25.18,zf-RING_2|PF13639.2|5.8e+03,zf-RING_2|PF13639.2|1.3e+03,zf-RING_2|PF13639.2|2.1e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|3.2e+02,zf-RING_11|PF17123.1|2.5e-07,zf-rbx1|PF12678.3|1.6e+04,zf-rbx1|PF12678.3|1.8e-06,zf-C3HC4_2|PF13923.2|9.4e+03,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|4.1e+03,zf-C3HC4_2|PF13923.2|5.2e-06 S_Transcript_24897:316-1164(+)
MEDFTSSSCSLNDNRPTTNNHIRDYLRTTCPVPLPFLSPCIDWNHSELRPGYDSDDGSGSDHHAYSKPFVVLDVIWNLGFVFVSIFVLLCTLQEKPTSPLRVWITGYALQCLLHVGFVYFEYHRRVHGSGSFEGHSHSRLAVVFLALDVFFMIFCIGMACIICLAFFCCIPIVAIAYAMTIREGASEDEIRLLPKYRFHQSCVPRISASTEFGSRKSTNEPAFLFQASECCICLTQYLEGAELCSLPCNHHFHYGCISRWLRINATCPLCKFNIRAKGDTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST