Transcript Information: S_Transcript_24899.p1


Annotated TAIR IDAT1G68070.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25515412-25516767 | Reverse length=343
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.955302654076
Replicate 213.392954364826
Replicate 313.034309079612
Condition 2: 8 Hour
Replicate 110.443812853259
Replicate 28.2008242814247
Replicate 37.9387467619725
Condition 3: 24 Hour
Replicate 113.324738316843
Replicate 212.694392994376
Replicate 312.056285155525


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24899.p1 GENE.S_Transcript_24899~~S_Transcript_24899.p1 ORF type:complete len:341 (+),score=32.79,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|2.8e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|4e+02,zf-RING_11|PF17123.1|3.2e-07,zf-rbx1|PF12678.3|2e+03,zf-rbx1|PF12678.3|2e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.3e+03,zf-C3HC4_2|PF13923.2|6.8e-06 S_Transcript_24899:816-1838(+)
ATGCTAGTTAGCATCTCATCTCATCTCATCTCATATCATATATCATACTCAATATCTCAAAGACCTCCAAAAATGGAGGATTTTACATCTAGTAGTAGTACCCTTAATGACAACAGACCCACAGCAAACAACTATATAAGAGACTATCTAAGGACCACCTGCTCTGTTCCCCTCCTTTTTTTCAGCCACTCGGAGCTCCGACCCGGATATGACTCTGATGATGGGTCGGGCTCAGATCATCATGCATATTCCAAGCCATTTGTGGTCCTTGATGTCATTTGGAATCTGGGTTTTGTTTTTGTGTCTATTTTTGTGTTATTATGTACTTTACAAGAGAAACCCACTAGCCCTTTGAGGGTTTGGATTACTGGGTACGCTTTGCAGTGCCTTTTGCATGTGGGTTTTGTTTATTTTGAGTATCACCGCAGGGTTCATGGCTCTGGTTCTTTTGAAGGTCACAGTCATAGCAGCATTGTTAAGAGATTGGAATCAGCAAATACGATAGCATCATCATTTTGGTGGGTTTTTGGATTTTACTGGATTGTAACGGGTGGCCAATCCCTTTTGCAGGATTCACCACGTCTTTATTGGTTAGCAGTTGTTTTCCTGGCACTTGATGTATTCTTCATGATATTCTGCATAGGGATGGCCTGTATCATTTGCCTAGCTTTCTTTTGTTGTATCCCTATTGTAGCAATTGCTTATGCCATGACAATCCGAGAAGGAGCATCTGAAGATGAGATCAGACTTCTTCCTAAATACAGGTTTCACCAGTCTTGTGTACCAAGGATATCTGCCTCTACTGAATTTGGGAGCAGGAAGTCCACTAATGAACCTGCTTTTCAATTCCAAGCTTCTGAGTGTTGCATTTGCTTGACTCAGTATCTAGAGGGAGCTGAATTATGCAGCCTTCCCTGCAACCACCATTTTCATTACGGATGTATCAGCAGATGGTTGCGGATAAATGCAACTTGTCCGCTATGTAAATTTAATATCAGGGCCAAGGGTGACACTTTGGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24899.p1 GENE.S_Transcript_24899~~S_Transcript_24899.p1 ORF type:complete len:341 (+),score=32.79,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|2.8e-13,zf-RING_11|PF17123.1|1.6e+04,zf-RING_11|PF17123.1|4e+02,zf-RING_11|PF17123.1|3.2e-07,zf-rbx1|PF12678.3|2e+03,zf-rbx1|PF12678.3|2e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.3e+03,zf-C3HC4_2|PF13923.2|6.8e-06 S_Transcript_24899:816-1838(+)
MLVSISSHLISYHISYSISQRPPKMEDFTSSSSTLNDNRPTANNYIRDYLRTTCSVPLLFFSHSELRPGYDSDDGSGSDHHAYSKPFVVLDVIWNLGFVFVSIFVLLCTLQEKPTSPLRVWITGYALQCLLHVGFVYFEYHRRVHGSGSFEGHSHSSIVKRLESANTIASSFWWVFGFYWIVTGGQSLLQDSPRLYWLAVVFLALDVFFMIFCIGMACIICLAFFCCIPIVAIAYAMTIREGASEDEIRLLPKYRFHQSCVPRISASTEFGSRKSTNEPAFQFQASECCICLTQYLEGAELCSLPCNHHFHYGCISRWLRINATCPLCKFNIRAKGDTLV*

Click here to download the sequence:
Link to NCBI Protein BLAST