Transcript Information: S_Transcript_24899.p2


Annotated TAIR IDAT5G52960.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21477250-21478269 | Forward length=170
E-Value2.5E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.424902154704
Replicate 238.609881725651
Replicate 343.750268376097
Condition 2: 8 Hour
Replicate 147.982128213549
Replicate 251.455251871371
Replicate 353.408040388037
Condition 3: 24 Hour
Replicate 135.922697295644
Replicate 237.647109229599
Replicate 334.049759946907


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24899.p2 GENE.S_Transcript_24899~~S_Transcript_24899.p2 ORF type:complete len:180 (+),score=38.57,DUF3143|PF11341.4|1.5e+04,DUF3143|PF11341.4|4.2e-22 S_Transcript_24899:87-626(+)
ATGTTGTCCATTAATTATTCTCTCTCAAACACTCTCACCAACATCAAAGATACCACCTTTACTCCTTTCCTATCACCAAACTCACCTTCATCTTCTACCCTCAATAGGCATCATCATTATCTCACAAACCATTTACAATTCCCCAAAACCCCACCATTTTCCCATCATATATCCTCAAGAAAACATCATATTTTCCTTTCAAAAGCTTCAGACTCAGAATCAGAAACAGAGCCTGTTGTTACACAAGAAGATGAGTGGCTGAGCAAATTGCCTGATAAAAAGAAGCCTTTGTATGCTCACAGCTTGCCTTGCGTTGAAGCTTGGCTTAGGAGCTTAGGGTTTTACCAAAGCAATGATGATAGGGCTGTTTGGTTCATTGAGAAATCTGATTGGCATGCTCAGCTTTCTCTTGATATGACTGATCTCTATATAAGATATTTGAAGAGTGGACCTGCCAATTTAGAGAAAGATGTGGAGAGGAGATTCAGTTATGCGCTGAGTAGAGAGGATATTGAGAATGCTGTGCTCGGAGGACCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24899.p2 GENE.S_Transcript_24899~~S_Transcript_24899.p2 ORF type:complete len:180 (+),score=38.57,DUF3143|PF11341.4|1.5e+04,DUF3143|PF11341.4|4.2e-22 S_Transcript_24899:87-626(+)
MLSINYSLSNTLTNIKDTTFTPFLSPNSPSSSTLNRHHHYLTNHLQFPKTPPFSHHISSRKHHIFLSKASDSESETEPVVTQEDEWLSKLPDKKKPLYAHSLPCVEAWLRSLGFYQSNDDRAVWFIEKSDWHAQLSLDMTDLYIRYLKSGPANLEKDVERRFSYALSREDIENAVLGGP*

Click here to download the sequence:
Link to NCBI Protein BLAST