Transcript Information: S_Transcript_249179.p1


Annotated TAIR IDAT1G43580.1
Annotated Gene NameSphingomyelin synthetase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16410673-16412612 | Reverse length=421
E-Value1.6E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1140871474675
Replicate 23.9435904040002
Replicate 34.811148543548
Condition 2: 8 Hour
Replicate 17.3145058575674
Replicate 26.8088234990472
Replicate 35.7666061153573
Condition 3: 24 Hour
Replicate 13.4825176579208
Replicate 24.0510194605065
Replicate 33.4116775040737


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249179.p1 GENE.S_Transcript_249179~~S_Transcript_249179.p1 ORF type:5prime_partial len:207 (+),score=43.17 S_Transcript_249179:2-622(+)
CAATTTCCAACTCATTCACTCAGACAGTCAGACCCCTCAAAATCGCACATCAAAACCCCACTCTCTCTGATCACCACCACCACCACCAGCAGCAGCATGGGGTTGAAACTGGGTGGTGGTGGGCTAGGAATTGCTGCAATCTCATACATAGCCATAGACTATCTCAGAGAGATCTCACCCTTATGGCATTCTCGTCTTCAACCTGCTCTTTGGTCTATTCTTTGTCTAATTGCTCTTTCTCGTGTCCCCTTTTACAAGCACTGGGCTTCTGAGTTTCGTTCTGCTCTTCCTTTTCTTGCTTCCATTGTTTTCCTCCTTTCTGCTCTTCTCTATGAGGCTCTCTCTGTTCGCTTTGTCACTGCTGTTCTTGGCCTTCATTGGCACCGAGACACTGCTCCTCTTCCTGACACCGGCCAGTGGCTACTCCTAGCTTTGAATGAGAAGCTTCCTGAAACTGTGGTGGACATTTTGAGAGCACATGTAGTAGGGTTGCATCATTTCTTGATGTTGTTTATCATGCTAGGTTTTTCTGTACTCTTCGACTCTGTAAAAGCCCCTGGCCTTGGACTAGGAGCAAGGTACTTGTTCACAATGGCGATCGGGCGACTTTGCGTGCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249179.p1 GENE.S_Transcript_249179~~S_Transcript_249179.p1 ORF type:5prime_partial len:207 (+),score=43.17 S_Transcript_249179:2-622(+)
QFPTHSLRQSDPSKSHIKTPLSLITTTTTSSSMGLKLGGGGLGIAAISYIAIDYLREISPLWHSRLQPALWSILCLIALSRVPFYKHWASEFRSALPFLASIVFLLSALLYEALSVRFVTAVLGLHWHRDTAPLPDTGQWLLLALNEKLPETVVDILRAHVVGLHHFLMLFIMLGFSVLFDSVKAPGLGLGARYLFTMAIGRLCVP*

Click here to download the sequence:
Link to NCBI Protein BLAST