Transcript Information: S_Transcript_249180.p1


Annotated TAIR IDAT1G43580.1
Annotated Gene NameSphingomyelin synthetase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:16410673-16412612 | Reverse length=421
E-Value3.3E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0004854333782
Replicate 23.4067542699104
Replicate 33.2546004853413
Condition 2: 8 Hour
Replicate 14.2337171953132
Replicate 22.7964810799658
Replicate 33.6048859920189
Condition 3: 24 Hour
Replicate 11.8739483386539
Replicate 22.2219423114066
Replicate 32.7200243966302


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249180.p1 GENE.S_Transcript_249180~~S_Transcript_249180.p1 ORF type:internal len:408 (+),score=63.10,PAP2_C|PF14360.2|3.4e-17 S_Transcript_249180:2-1222(+)
CAATTTCCAACTCATTCACTCAGACAGTCAGACCCCTCAAAATCGCACATCAAAACCCCACTCTCTCTGATCACCACCACCACCACCAGCAGCAGCATGGGGTTGAAACTGGGTGGTGGTGGGCTAGGAATTGCTGCAATCTCATACATAGCCATAGACTATCTCAGAGAGATCTCACCCTTATGGCATTCTCGTCTTCAACCTGCTCTTTGGTCTATTCTTTGTCTAATTGCTCTTTCTCGTGTCCCCTTTTACAAGCACTGGGCTTCTGAGTTTCGTTCTGCTCTTCCTTTTCTTGCTTCCATTGTTTTCCTCCTTTCTGCTCTTCTCTATGAGGCTCTCTCTGTTCGCTTTGTCACTGCTGTTCTTGGCCTTCATTGGCACCGGTTTTTCTGTACTCTTCGACTCTGTAAAAGCCCCTGGCCTTGGACTAGGAGCAAGGTACTTGTTCACAATGGCGATCGGGCGACTTTGCGTGCCATAACTTTTGTGTCAACAATTCTCCCATCAGCTCGGCCATGGTGTGCTGCTGCTCGCTTTAAAGTTCCTGCATATCCTCACCATTGGGCTCAGAAATATTACGTTCCGTATGCTTCAGATGCCACTGCTATTCGTCAGTTGCTGAAACATGATCTTGCATATGCTAATCCTGGTGAATTACTTGGCGATTACCGTCCTGACTGGGGTTCAATGAGCTTTCTAATTGATTTTCTGCGGCCTACTCCTTATGAGGGATCAACGTGGTATCATCTGCTGAAGAAAGCTGGAGGTGGTTGCAATGATCTCCTGTACAGTGGCCACATGCTTGTCGCTGTACTGACGGCCATGGCTTGGATGGAAGCATATGGAGGATTTAGCTCAGCCCTTGTATGGCTGCTCGTGATGCACAGTGCACAGAGAGAAATCAGGGAGCGCCATCATTATAGTGTGGACTGTATTGTGGCTATCTATGTTGGCATTCTCTTGTGGAAAATGACAGGCTTCATTTGGTCATCTAAGAACGTTTCTAGAATCAAAAGGCTCGCTAGACTAGAAACGATTCAAGGTAAGCTCGTCCAGGCTGCTAAAGATTCGGACATGGAACAAGTGCGGGAACTTCTGAGAGAAGTCGAGTTAGGCAGTCAGGATAAACAGGATGGTGGAGCGAGCAGCAAGTTTATGTGGTTGTTCCCTTTGGTAACTATAGTCTCCACCTTGACTATTGTTCTTTTGGCGTTCAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249180.p1 GENE.S_Transcript_249180~~S_Transcript_249180.p1 ORF type:internal len:408 (+),score=63.10,PAP2_C|PF14360.2|3.4e-17 S_Transcript_249180:2-1222(+)
QFPTHSLRQSDPSKSHIKTPLSLITTTTTSSSMGLKLGGGGLGIAAISYIAIDYLREISPLWHSRLQPALWSILCLIALSRVPFYKHWASEFRSALPFLASIVFLLSALLYEALSVRFVTAVLGLHWHRFFCTLRLCKSPWPWTRSKVLVHNGDRATLRAITFVSTILPSARPWCAAARFKVPAYPHHWAQKYYVPYASDATAIRQLLKHDLAYANPGELLGDYRPDWGSMSFLIDFLRPTPYEGSTWYHLLKKAGGGCNDLLYSGHMLVAVLTAMAWMEAYGGFSSALVWLLVMHSAQREIRERHHYSVDCIVAIYVGILLWKMTGFIWSSKNVSRIKRLARLETIQGKLVQAAKDSDMEQVRELLREVELGSQDKQDGGASSKFMWLFPLVTIVSTLTIVLLAFN

Click here to download the sequence:
Link to NCBI Protein BLAST