Transcript Information: S_Transcript_249185.p1


Annotated TAIR IDAT1G43580.1
Annotated Gene NameSphingomyelin synthetase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16410673-16412612 | Reverse length=421
E-Value2E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2718537942782
Replicate 23.6537103725821
Replicate 35.8734828291722
Condition 2: 8 Hour
Replicate 18.0140001828716
Replicate 25.5573381971295
Replicate 37.6031048782099
Condition 3: 24 Hour
Replicate 14.3133209440027
Replicate 24.1863091446756
Replicate 32.8916993585483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249185.p1 GENE.S_Transcript_249185~~S_Transcript_249185.p1 ORF type:complete len:157 (-),score=10.37,PAP2_C|PF14360.2|1.4e-17,PAP2_C|PF14360.2|1.2e+03 S_Transcript_249185:238-651(-)
ATGGCTTGGACGGAAGCGTATGGAGGATTTAGCTCAGCCCTTGTATGGCTGCTCGTGATGCACAGTGCACAGAGAGAAATCAGGGAGCACCATCATTATAGTGTGGACTGTATTGTGGCTATCTATGTTGGCATTCTCTTGTGGAAAATGACAGGCTTCATTTGGTCATCTAAGAACGTTTCTAGAATCAAAAGGCTCGCTAGACTAGAAACGATTCAAGGTAAGCTCGTCCAGGCTGCTAAAGATTCGGACATGGAACAAGTGCGGGAATTGCTGAGAGAAGTCGAGTTAGGCAGTCAGGATAAACAGGATGGTGGAGCGAGCAGCAAGTTTATGTGGTTGTTCCCTTTGGTAACTATAGTCTCCACCTTGACTATTGTTCTTTTGGCGTTCAATTTCACTAGCGACGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249185.p1 GENE.S_Transcript_249185~~S_Transcript_249185.p1 ORF type:complete len:157 (-),score=10.37,PAP2_C|PF14360.2|1.4e-17,PAP2_C|PF14360.2|1.2e+03 S_Transcript_249185:238-651(-)
MAWTEAYGGFSSALVWLLVMHSAQREIREHHHYSVDCIVAIYVGILLWKMTGFIWSSKNVSRIKRLARLETIQGKLVQAAKDSDMEQVRELLREVELGSQDKQDGGASSKFMWLFPLVTIVSTLTIVLLAFNFTSDG*

Click here to download the sequence:
Link to NCBI Protein BLAST