Transcript Information: S_Transcript_249210.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42580801976289
Replicate 20.35300463292024
Replicate 30
Condition 2: 8 Hour
Replicate 10.85301561268532
Replicate 20.35794957823563
Replicate 31.193687465879
Condition 3: 24 Hour
Replicate 10.52427720377426
Replicate 20.36262098522156
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249210.p1 GENE.S_Transcript_249210~~S_Transcript_249210.p1 ORF type:5prime_partial len:125 (+),score=16.26,PPR_2|PF13041.2|3.7e-14,PPR_2|PF13041.2|5.3e-16,PPR_2|PF13041.2|0.00015,PPR_1|PF12854.3|4.4e-16,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|1.2e+03,PPR|PF01535.16|6.7e-11,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.15,PPR|PF01535.16|1.1e+04,PPR_3|PF13812.2|7.5e-07,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|1.6 S_Transcript_249210:2-376(+)
GAGATGTCACTCAAAGGAGTGACTCCAAATGTGCTCACATACAACACAGTCATAGATGGATTGTGCAAGTTTGGTAGAATTGAAGAAGCATTTAGTATTTTCGATGAGATGCAAATCAGGGGTGGAGTTGCTGACCTCGTTACTTATGGTGCTCTACTAAGTAGCCTGTGCAAAAACCATCATCTTGACCAGGCCTTCAAACTTTTTCACACTATGGAACATAAAGGATTAATTCCAAACATAATAATCTACGTGATCCTCATAGATGGATTTTGTGAGGCTAGCCAAGTTGATGTTGTTAGGAAGCTAATCTCACTTCTTTTAGGGAAAAACATACGGGGTGATGCTCAGTGGTACAATGTCATCATCAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249210.p1 GENE.S_Transcript_249210~~S_Transcript_249210.p1 ORF type:5prime_partial len:125 (+),score=16.26,PPR_2|PF13041.2|3.7e-14,PPR_2|PF13041.2|5.3e-16,PPR_2|PF13041.2|0.00015,PPR_1|PF12854.3|4.4e-16,PPR_1|PF12854.3|8e-10,PPR_1|PF12854.3|3.1e-05,PPR_1|PF12854.3|1.2e+03,PPR|PF01535.16|6.7e-11,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.15,PPR|PF01535.16|1.1e+04,PPR_3|PF13812.2|7.5e-07,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|1.6 S_Transcript_249210:2-376(+)
EMSLKGVTPNVLTYNTVIDGLCKFGRIEEAFSIFDEMQIRGGVADLVTYGALLSSLCKNHHLDQAFKLFHTMEHKGLIPNIIIYVILIDGFCEASQVDVVRKLISLLLGKNIRGDAQWYNVIIN*

Click here to download the sequence:
Link to NCBI Protein BLAST