Transcript Information: S_Transcript_2494.p1


Annotated TAIR IDAT5G40390.1
Annotated Gene NameRaffinose synthase family protein
Annotated Gene Symbol(s)SIP1
Annotation TypeOrtholog
Chromosome Positionchr5:16161720-16165085 | Forward length=783
E-Value3.5E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1487626432452
Replicate 21.1110757331123
Replicate 31.3268155455828
Condition 2: 8 Hour
Replicate 10
Replicate 20.8047427568247
Replicate 30
Condition 3: 24 Hour
Replicate 12.2002040925778
Replicate 21.1413430290247
Replicate 32.9032569099414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2494.p1 GENE.S_Transcript_2494~~S_Transcript_2494.p1 ORF type:5prime_partial len:139 (+),score=22.39,Raffinose_syn|PF05691.8|2e-73 S_Transcript_2494:1-417(+)
TTTTGGCCTACTGATCCATATGGTGATATTAATGGCACATACTGGCTCCAAGGATGTCATATGGTGCATTGTGCCTACAATAGTTTGTGGACGGGCAACTTCATACACCCTGACTGGGACATGTTCCAATCAACCCATCCTTGTGCCGAGTTTCATGCTGCTTCTCGAGCCATCTCTGGCGGTCCAATCTATGTCAGTGATGCTGTTGGCAAGCACAACTTCCCGTTGCTCAAGAAGCTTGTTTTGCCTGATGGCTCGATCCTTCGATGTGATTACTATGCCCTTCCTACTAGGGATTGCCTCTTTGTGGATCCTCTGCATGATGGCAAAACAATGCTCAAAATTTGGAACCTCAACAAGGTACTTATATTCCAACCATCTGATTTCCACATTTCCAATTTTGTCAATGTAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2494.p1 GENE.S_Transcript_2494~~S_Transcript_2494.p1 ORF type:5prime_partial len:139 (+),score=22.39,Raffinose_syn|PF05691.8|2e-73 S_Transcript_2494:1-417(+)
FWPTDPYGDINGTYWLQGCHMVHCAYNSLWTGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDAVGKHNFPLLKKLVLPDGSILRCDYYALPTRDCLFVDPLHDGKTMLKIWNLNKVLIFQPSDFHISNFVNVG*

Click here to download the sequence:
Link to NCBI Protein BLAST