Transcript Information: S_Transcript_24942.p1


Annotated TAIR IDAT3G13130.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4223008-4223613 | Forward length=201
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.19524592528774
Replicate 30.10880670255812
Condition 2: 8 Hour
Replicate 10.18872026829321
Replicate 20
Replicate 30.31439303252185
Condition 3: 24 Hour
Replicate 10.25775673735214
Replicate 20.13370980281031
Replicate 30.29760524371818


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24942.p1 GENE.S_Transcript_24942~~S_Transcript_24942.p1 ORF type:complete len:339 (-),score=52.36 S_Transcript_24942:171-1187(-)
ATGAACTTTCTTCATCTCACAACCTGCACCAGGGGTACTATAGTAATTTGTATCCTTGGAGTGCCTGTAATGAAACAGTACATAGCCTGTGATTGCTTCCATATATATAGCAAGAAAAAAAAAAAAAGCCTATTTCTCATGCTAACCAATTCTCATTCCAAAACAAGGCTTCAACTCTTGCATCCTCTCGTGTTTCCACATTTTAGGACCTATTTAATTTTCAAAATGGATGACTTCCATGATGAGCCCTTAAAGCTTGAAATTGATCCCTTGTTTCTCAAAAACCAAGCCACAAGAACAAGAACCAGCAAGTACCCCCACCTTCTCAGAAAGGCCTTGGTATTGCTCCTTCCGATGTCACTGCTCTCTCTTCTCCTTACCTTTTTCACTGGTGTCTCCTTTCTCCAGTCTTACACCTACTACTTCTCCACGTTCCTCTTTCCACTCCTTACACAAGCATTGGAGAAAAAGTACATGTTCCTCCTCTGCAATGGAATCCTTGTGTTTCTAGCTGCTGGCAAATCTGGTTTTTGCAGTGCTGTTTTTTCTTCTCCTCCTCCTACTTCAAGGCTTCAGGGAGAAGCTGAAACTAACCATGTGCAAGGTGAAATCACGATAAAGTATGATGAAGCATCCCATACAATGTTGCAGCCATCAGCAGTGCCTGTTAATTCTCTGTATGAAGAAGAAACAGAAACATGTGTCCAGACCGTTGGCTCTCCATACATAGTTTCATCGGCAATGTCAGAGCTAGAGAAAGAACACCTTCAAGCAAAACAACAGCAAGAAGAAGAAGAAGCAGATGTTTACAACGTACCTTCGACAATAGAAGGCTCAGAAAAAGGAGCTCAAACAGCAGAAGTGATAGAAGATCAAGAAGGGGAATTAGACGAAAACAAGAACGAGTCAATTGGAGTCAGCAGAGGAGATCACGATACAGAGAGCAAAGGTCCTGCAAACCGCACCATAAAAGACAGATTGAGAGGAGTTATCCAGGATGAGAGATCTAGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24942.p1 GENE.S_Transcript_24942~~S_Transcript_24942.p1 ORF type:complete len:339 (-),score=52.36 S_Transcript_24942:171-1187(-)
MNFLHLTTCTRGTIVICILGVPVMKQYIACDCFHIYSKKKKKSLFLMLTNSHSKTRLQLLHPLVFPHFRTYLIFKMDDFHDEPLKLEIDPLFLKNQATRTRTSKYPHLLRKALVLLLPMSLLSLLLTFFTGVSFLQSYTYYFSTFLFPLLTQALEKKYMFLLCNGILVFLAAGKSGFCSAVFSSPPPTSRLQGEAETNHVQGEITIKYDEASHTMLQPSAVPVNSLYEEETETCVQTVGSPYIVSSAMSELEKEHLQAKQQQEEEEADVYNVPSTIEGSEKGAQTAEVIEDQEGELDENKNESIGVSRGDHDTESKGPANRTIKDRLRGVIQDERSST*

Click here to download the sequence:
Link to NCBI Protein BLAST