Transcript Information: S_Transcript_24946.p1


Annotated TAIR IDAT3G13130.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4223008-4223613 | Forward length=201
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1280441331997
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24946.p1 GENE.S_Transcript_24946~~S_Transcript_24946.p1 ORF type:5prime_partial len:177 (-),score=34.20 S_Transcript_24946:338-868(-)
GAAATTGATCCCTTGTTTCTCAAAAACCAAGCCACAAGAACAAGAACCAGCAAGTACCCCCACCTTCTCAGAAAGGCCTTGGTATTGCTCCTTCCGATGTCACTGCTCTCTCTTCTCCTTACCTTTTTCACTGGTGTCTCCTTTCTCCAGTCTTACACCTACTACTTCTCCACGTTCCTCTTTCCACTCCTTACACAAGCATTGGAGAAAAAGTACATGTTCCTCCTCTGCAATGGAATCCTTGTGTTTCTAGCTGCTGGCAAATCTGGTTTTTGCAGTGCTGTTTTTTCTTCTCCTCCTCCTACTTCAAGGCTTCAGGGAGAAGCTGAAACTTCGACAATAGAAGGCTCAGAAAAAGGAGCTCAAACAGCAGAAGTGATAGAAGATCAAGAAGGGGAATTAGACGAAAACAAGAACGAGTCAATTGGAGTCAGCAGAGGAGATCACGATACAGAGAGCAAAGGTCCTGCAAACCGCACCATAAAAGACAGATTGAGAGGAGTTATCCAGGATGAGAGATCTAGTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24946.p1 GENE.S_Transcript_24946~~S_Transcript_24946.p1 ORF type:5prime_partial len:177 (-),score=34.20 S_Transcript_24946:338-868(-)
EIDPLFLKNQATRTRTSKYPHLLRKALVLLLPMSLLSLLLTFFTGVSFLQSYTYYFSTFLFPLLTQALEKKYMFLLCNGILVFLAAGKSGFCSAVFSSPPPTSRLQGEAETSTIEGSEKGAQTAEVIEDQEGELDENKNESIGVSRGDHDTESKGPANRTIKDRLRGVIQDERSST*

Click here to download the sequence:
Link to NCBI Protein BLAST