Transcript Information: S_Transcript_249631.p1


Annotated TAIR IDAT5G03460.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:864391-865509 | Forward length=89
E-Value5.2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.967911224403
Replicate 248.291280639875
Replicate 348.879699130662
Condition 2: 8 Hour
Replicate 165.16919978033
Replicate 251.001557038817
Replicate 350.084788778138
Condition 3: 24 Hour
Replicate 164.312559087693
Replicate 249.131339780893
Replicate 348.327553615397


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249631.p1 GENE.S_Transcript_249631~~S_Transcript_249631.p1 ORF type:5prime_partial len:143 (+),score=6.90 S_Transcript_249631:3-431(+)
TACTACTTATATCCGACCCCACCTATTGCGATCTCTAATCCTCATAATAAAACAGCAGCGATCCATCATCAAAAATACAATACTTCCAAACTCTCTGGTGACCAAGCAACGAGCAACCACCAAGAAGCAACAAAACCACAGATCGTGACCCACCAGAGATTTGTAAACATGGTTTGTTTGGCGTGTTTGTTGCCTCTTTTCCTAATCCCAGTTGTCAACGCTCTTCCCCTTTTGTTTCATCTCATCATGGCCAAAGTGTATCGTTTATTTGGGTGGGAGTACAGGAAACCCGAAAGGGCACCACCCGCATGTCCATACAAGCCACCCGTACCCGGCAAGAATACTAGTGATGTAAATGTAGAACCTGAATCTTCGTCCAAGGATACGAATCCAAAACCAGTTGAAGTGGACAACAAAAAGAGTGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249631.p1 GENE.S_Transcript_249631~~S_Transcript_249631.p1 ORF type:5prime_partial len:143 (+),score=6.90 S_Transcript_249631:3-431(+)
YYLYPTPPIAISNPHNKTAAIHHQKYNTSKLSGDQATSNHQEATKPQIVTHQRFVNMVCLACLLPLFLIPVVNALPLLFHLIMAKVYRLFGWEYRKPERAPPACPYKPPVPGKNTSDVNVEPESSSKDTNPKPVEVDNKKSD*

Click here to download the sequence:
Link to NCBI Protein BLAST