Transcript Information: S_Transcript_249649.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64909759110196
Replicate 20
Replicate 30.44982283130733
Condition 2: 8 Hour
Replicate 11.0402629422992
Replicate 21.0913096897428
Replicate 31.0397974441454
Condition 3: 24 Hour
Replicate 11.5984061090679
Replicate 20.82916383815905
Replicate 30.30758590737947


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249649.p1 GENE.S_Transcript_249649~~S_Transcript_249649.p1 ORF type:3prime_partial len:82 (+),score=17.68,RVT_1|PF00078.23|1.5e-12 S_Transcript_249649:648-890(+)
ATGATCGTGTCTTGGAATTTTTTGGATAGGGTGTTGGAGGCTAAGGGGTTTGGGGAGCGTTGGCGTAAGTGGGTGCTAGGTTGCTTTGGCAATGCTAGTTTTTCTGTTTTGGTGAATGGGGCCCCTAGGGACTGGTTTTCTTCTTTTCGGGGTTTGCCTCAAGGCGATCCTTTGTCTCCCTTTCTTTTTACCTTGATGGTGGACTTCTTGAGTCGGATGCTAGAGAGAGGGGTGGAGAAAGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249649.p1 GENE.S_Transcript_249649~~S_Transcript_249649.p1 ORF type:3prime_partial len:82 (+),score=17.68,RVT_1|PF00078.23|1.5e-12 S_Transcript_249649:648-890(+)
MIVSWNFLDRVLEAKGFGERWRKWVLGCFGNASFSVLVNGAPRDWFSSFRGLPQGDPLSPFLFTLMVDFLSRMLERGVEKG

Click here to download the sequence:
Link to NCBI Protein BLAST