Transcript Information: S_Transcript_249723.p1


Annotated TAIR IDAT4G36690.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)ATU2AF65A
Annotation TypeOrtholog
Chromosome Positionchr4:17294139-17297609 | Reverse length=573
E-Value1.1E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.287226204804
Replicate 212.447877376808
Replicate 310.836004469353
Condition 2: 8 Hour
Replicate 113.774376625074
Replicate 213.318649190187
Replicate 313.187625561058
Condition 3: 24 Hour
Replicate 110.454944238689
Replicate 213.051533514784
Replicate 310.108445812167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249723.p1 GENE.S_Transcript_249723~~S_Transcript_249723.p1 ORF type:internal len:257 (-),score=70.31,RRM_1|PF00076.18|3.8e+02,RRM_1|PF00076.18|0.00019,RRM_1|PF00076.18|2e-16,RRM_6|PF14259.2|0.0012,RRM_6|PF14259.2|6.6e-05,RRM_5|PF13893.2|0.00016,RRM_5|PF13893.2|3.1 S_Transcript_249723:1-768(-)
CTTCCCCCCACAGCTAATGAGCAGTCTGTGGCCACCTATTTCAGCCATGTTATGGCCACAATTGGGGGAAATACTGCAGGCCCAGGTGATGCTGTTGTTAATGTCTACATAAATCACGAAAAGAAGTTTGCTTTTGTGGAGATGAGATCCGTGGAAGAGGCTAGTAATGCAATGGCACTAGATGGTATCATATTTGAGGGAACACCTGTTAAGGTGAGAAGACCCAGCGACTACAACCCATCACTGGCTGCAGCACTTGGTCCAAGTCAGCCTAATCCCAACTTGAACTTGGCTGCTGTTGGATTGACGCCAGGGTCTGCAGGTGGTCTTGAGGGTCCTGACAGAATATTTGTGGGCGGGCTTCCTTACTACTTTACTGAGGCTCAGGTCCGAGAGTTGTTAGAATCTTTTGGAGCTCTTCGGGGCTTTGATCTTGTCAAGGACAGAGAAACTGGGAACTCAAAAGGTTATGCGTTTTGTGTTTACCAAGATCTATCTGTGACAGACATTGTTTGTCAAGCACTTAATGGAATCAAAATGGGGGATAAAACCCTTACTGTTAGGCGTGCAAACCAGGGTGCTCAACAACCCAAGCCAGAGCAAGAGCATGTATATATGCATGCTCAGCAGCAGATAGCACTGCAGAAAATGATATTGCAACCCGGTGGTCTTCCGACCAAAGTTGTGTGCTTAACCAACTGTGTGAATCCTGATGAACTGAGTGATGATCAGGAGTTTGAAGATATATTGGATGACATGAGACAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249723.p1 GENE.S_Transcript_249723~~S_Transcript_249723.p1 ORF type:internal len:257 (-),score=70.31,RRM_1|PF00076.18|3.8e+02,RRM_1|PF00076.18|0.00019,RRM_1|PF00076.18|2e-16,RRM_6|PF14259.2|0.0012,RRM_6|PF14259.2|6.6e-05,RRM_5|PF13893.2|0.00016,RRM_5|PF13893.2|3.1 S_Transcript_249723:1-768(-)
LPPTANEQSVATYFSHVMATIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGTPVKVRRPSDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIVCQALNGIKMGDKTLTVRRANQGAQQPKPEQEHVYMHAQQQIALQKMILQPGGLPTKVVCLTNCVNPDELSDDQEFEDILDDMRQE

Click here to download the sequence:
Link to NCBI Protein BLAST