Transcript Information: S_Transcript_24980.p1


Annotated TAIR IDAT5G58720.1
Annotated Gene Namesmr (Small MutS Related) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23719976-23722974 | Reverse length=519
E-Value6E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.621278051555
Replicate 212.952992578928
Replicate 314.714527068851
Condition 2: 8 Hour
Replicate 114.354510041425
Replicate 214.144781720601
Replicate 313.614638147698
Condition 3: 24 Hour
Replicate 118.133602209396
Replicate 216.766346628524
Replicate 315.675636200169


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_24980.p1 GENE.S_Transcript_24980~~S_Transcript_24980.p1 ORF type:3prime_partial len:465 (+),score=125.90,DUF1771|PF08590.6|1.6e+03,DUF1771|PF08590.6|7.2e-14 S_Transcript_24980:495-1886(+)
ATGAAGCATTCAAAGAAGAAAAGGAGAAGACAACAGCCTTCAAAGCAAGCGGGTAATATTTCTGTTGAGAATTCTAATGGTGGTGAAATGGAGAAAGAAAAGATCATTATAAGCAGTTTGGTAGAGGCTTTTTCATTGGCTTCTGTAGAAGAAGCAAAGGCAGCTTATGATGAGGCCAATGGGGATGCTAACAAAGCAGCTGAGATCTTAAGTGGGTTATCATCATCATTATCATCTGATAATAATTCTGAGATTTTTAATGGGTTATCTGATAATAGTTCCGAGGCTTTCAGGTCTAGTTGTTCTAGTTCAACCCAAAGTGTTGGACTAGATTCTAGTTCATCTGATGGGTTTAATGATTCTAATGGTGCGAGTGATGATTTGAACAATGGTAGAGGGTTCAGAGGGAATAGAGGGAAAAAGGTGGTTGCTGCTACTGGCACTGTTTCTACTGTGTTGGGGAAAGATTACTTGTCGTCTACCCCAAAGAAGGAGCTTTTGAAGCAGAAAGGGATACATGGTTCTAAGGTTAATATTGAGGAGGCCGAACAGTTTTTGTGCTCAATGCTTGGAAATGACTGTGATCTCGGCATGGGTGTCGTCAAAGATGTTCTTTGTAGCTGTGGATATAATGTTGAGAAGGCCTTGGAAGTGTTGCTTGATTTATCTGCAGGCTCTTGTGAACAGTCTCAAAATGATAGCTATTCTAGCTTTAGTGCAAACAATGGAGATGATACAAAAAACTTGAATTTCATTGATGATCTCACAGACAAAGGATATGATTCGACTTCCCATTCCTCTAAAAGTGAAGTTCAGGATAGTTTGCTTAACATGACTTGCAGGAATTATGCAGAAGTTCTTGTTTCTTCTAAGTCATCTCGCAAACTGGCTGCAGCAAGTCTAAAAACTGAAGGACCAGAGCTCCCACAACAAGTGTTGGAGTCTTTATTTAATATTCCAAAGAGCTCAGCGCGTGAACCAGAAATTACGAACTGGAGGAATGTTGTAAAGCAAATGGAGTCTTTTGCACAGAAGCGAGTTGGGCTTTGTCCACCTGGCAATGCTGCACCCGAGCTGAATAACCTAGCAAAAGGAGCTGAATATCAGGTTTTTCGAGAATCTGCACGTGAGCAGTGGGATAAAATGAAGACTTTTTACCAAAAGGCTGCTGCGTATTCTGGCGGAGAAAAGAATTATGCTTCTTACATGTCTGAAAAGGGTAAATTGTACAGCAAAATGGCTCGAGAAGCAGATGAAAAAGCAAGCATGGAAATATTTAAAGCCAGGAACAAAGATATAGAGAATGTGCTGACCATTGATTTGCACGGGCAACATATTAAACCTGCCATGAGGCTTGTGAAGCTTCATCTTCTCTTTGGAACATATATATCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_24980.p1 GENE.S_Transcript_24980~~S_Transcript_24980.p1 ORF type:3prime_partial len:465 (+),score=125.90,DUF1771|PF08590.6|1.6e+03,DUF1771|PF08590.6|7.2e-14 S_Transcript_24980:495-1886(+)
MKHSKKKRRRQQPSKQAGNISVENSNGGEMEKEKIIISSLVEAFSLASVEEAKAAYDEANGDANKAAEILSGLSSSLSSDNNSEIFNGLSDNSSEAFRSSCSSSTQSVGLDSSSSDGFNDSNGASDDLNNGRGFRGNRGKKVVAATGTVSTVLGKDYLSSTPKKELLKQKGIHGSKVNIEEAEQFLCSMLGNDCDLGMGVVKDVLCSCGYNVEKALEVLLDLSAGSCEQSQNDSYSSFSANNGDDTKNLNFIDDLTDKGYDSTSHSSKSEVQDSLLNMTCRNYAEVLVSSKSSRKLAAASLKTEGPELPQQVLESLFNIPKSSAREPEITNWRNVVKQMESFAQKRVGLCPPGNAAPELNNLAKGAEYQVFRESAREQWDKMKTFYQKAAAYSGGEKNYASYMSEKGKLYSKMAREADEKASMEIFKARNKDIENVLTIDLHGQHIKPAMRLVKLHLLFGTYIS

Click here to download the sequence:
Link to NCBI Protein BLAST