Transcript Information: S_Transcript_249820.p1


Annotated TAIR IDAT1G72370.1
Annotated Gene Name40s ribosomal protein SA
Annotated Gene Symbol(s)P40, AP40, RP40, RPSAA
Annotation TypeOrtholog
Chromosome Positionchr1:27243148-27244842 | Reverse length=298
E-Value6E-150
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.605684774459
Replicate 224.465667628135
Replicate 325.442454399158
Condition 2: 8 Hour
Replicate 127.941187973273
Replicate 224.586883158511
Replicate 326.943794167353
Condition 3: 24 Hour
Replicate 112.112014608646
Replicate 215.93198635565
Replicate 314.816910574623


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249820.p1 GENE.S_Transcript_249820~~S_Transcript_249820.p1 ORF type:complete len:303 (+),score=92.68,Ribosomal_S2|PF00318.16|8.4e-14,Ribosomal_S2|PF00318.16|1e-12 S_Transcript_249820:108-1016(+)
ATGGCGACTACTCAAAAGCAATTATCTGAAAAGGAAGCTGACATCCTGATGATGTTGGCAGCTCATGTTCATCTTGGTACCAAGAACTGTGACTTCCAAATGTTGCGTTATGTCTTCAAACGCCGTTCTGATGGGATTCACATCATAAACCTTGAAAAGACATGGGAAAAGCTTCAAATGGCTGCAAGGGTTATTGTAGCAATTGAGAACCCACAGGATATAATTGTCCAATCTGCTAGACCATATGGTCAGAGGGCTGTTCTCAAGTTCGCTCAGTACACTGGAGCTCATGCTATTGCTGGGAGACATACTCCTGGTACATTCACGAATCAGCTTCAGACTTCTTTCAGCGAGCCCCGTCTCTTGATCCTCACTGACCCTCGTACTGATCACCAGCCCATTAAGGAAGCTGCCCTAGGAAACATTCCCACCATTGCCTTCTGTGATACTGATTCTCCCATGCGCTACGTGGACATTGGTATTCCTGCCAACAACAAGGGCAAGCACAGCATTGGTTGTCTGTTCTGGCTCTTGGCACGTATGGTTTTGCAGATGCGTGGAACCCTTCGCCCCGCACAGAAATGGGATGTCATGGTTGATCTGTTTTTCTACAGAGATGCTGACGAAACCAAGGACCAAGAGGAGGAAGAAGCTGCTCCTGTTGCTGATTTCACGGATTACTCTGCCGGTGCTATTGGTGCTCTTTCAGCTGATCAATGGGGTGCCCCCATGCCCGAGACACAATGGAATGTTGATATGGCTGCGGCACCACCATCGGCTCCTGTTGCTGGTGTCGCTGGTTGGGCTGCTGCACCTCCAGTTGCTGCTGGAGATGGTGGTTGGGATGAGGCTGTTCCACCACCTGCTGCTGCCACTGGTGCCCAACTAGCTGCCACTGGTTGGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249820.p1 GENE.S_Transcript_249820~~S_Transcript_249820.p1 ORF type:complete len:303 (+),score=92.68,Ribosomal_S2|PF00318.16|8.4e-14,Ribosomal_S2|PF00318.16|1e-12 S_Transcript_249820:108-1016(+)
MATTQKQLSEKEADILMMLAAHVHLGTKNCDFQMLRYVFKRRSDGIHIINLEKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTLRPAQKWDVMVDLFFYRDADETKDQEEEEAAPVADFTDYSAGAIGALSADQWGAPMPETQWNVDMAAAPPSAPVAGVAGWAAAPPVAAGDGGWDEAVPPPAAATGAQLAATGWN*

Click here to download the sequence:
Link to NCBI Protein BLAST