Transcript Information: S_Transcript_249848.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15056860670541
Replicate 20.093618626128069
Replicate 30.052171813532109
Condition 2: 8 Hour
Replicate 10.030163211198208
Replicate 20.031643350268355
Replicate 30.030149713726989
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.14269897824677


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249848.p1 GENE.S_Transcript_249848~~S_Transcript_249848.p1 ORF type:3prime_partial len:707 (-),score=100.81,RVP_2|PF08284.7|1.6e-32,Retrotrans_gag|PF03732.13|1.4e-13 S_Transcript_249848:3-2120(-)
ATGTGTAGGAACAAACTGGCTCGTAGGAATACCATTCGTAGGGATACCTCTAGCTCTAGTGGGGGAGATATGGCACAAGAAACACAAGAGCAAATTCTGGCCCGAATGAGGCATGTGGAGGAGATTCTGATATCACAACGGCAAGGGGGAGGTAACTATTACGACAAAATAGTTAAGCTAAATCCACCGAAATATGAGGGAGGACCAAACCCAACCGATCTAGAGTCTTGGATCAATGACTGGGAGACAATTTTCACTACTACTGAATGCCCCTATGACCGGAGGATCACCCAGATAGACTTTTACTTGAAGGAAGAAGCTGGTGACTGGTGGAGAGAGAAAAAGCCCGAGTTACTAGCTACCGAGGGTTTTGACTGGGCGATGCTGATTGAAAGGTTGAGGGAACGGTTTTACCCGAGGGCCTTGAAGAGAAAGAAAAAGGCGGAGTTTGAGAGCTTGATACAGGGGGACATGACTGTTGCTGAGTACGCCTCGAAGTTTATACAGCTGTCTAGGTTCGCTGAAAACCTAGTAAAAGATGAAAAGGATAAGGTCGAGAGATTTGAGGACGGCCTGAACTTTAAGCTCCAAGAACTGGTGTCTGGACAATGTGAGACTTTCTCAGAAGTCCTGGACAAGACCATCAACATGGAGCGAGTGGTCGACAAGAGAAAAGAGGCCAATAGCAAGGGCAAGAAGGCTCGTGAAACGGGACAGCAATCGAAGGAGGAGAACTCGTCGAAAAAGTTTAAGGCTGGGGGAAACTCACACCATGGGGGTGGAAGTTTTCAAAAAGGTAGAGGTGGAAACAGCAGTGGAGGAAGAGGAAATGGGACTGGTAACTGTCGCAAGTGTGGTAAGCTCTATCACCCTCGAACCAATTGCAAGGGTGAAGTGTGGGAATGCAACGCCTGTGGCAAGAAAGGCCACCGAGCTTTTGAGTGTTGGACAAACCCACCCGAGGGAAATAACGGAAACAACAATCGTAGGGGAGGTGGAAACCACCAAGGAGGACGGAATGGTGGAAACAACAGAAGCTACCAAGGCCAGACCCAGAGAACCTTCCACAACAACAACAGCAATCAGCAACAAACTCAGCAGTCCGGAACCTACCAACCAGCGGGAAATGGTGGGACGAACAATCATGGCAATCAGAACGTTCAGCCTAACCCAAACAACAATCGGGGAAGGATTTTCGTGATGAACCGAGCTGAAGCTGAAAACAACCCAGATGTTGTGGTTGGTACTTTTCTTGCTAAATCCTTACCTGCTTATATACTGTTTGATTCGGGAGCATCCCATTCTTTTATTTCCTCTGCATTTGTACACAAACACAATTTAGTACCTACCTCTGAGTGTAATGCTAGTATTGCTATGCCCACGGGCATGATCGTGAACTGTAGTAGACTTTTCGAGAACATTCCTATTAATGTGGCTGGGTCGGAGTTACCTGCCAACCTGATACAGTTTGACCTGACCGGGTTTGATATTATCTTGGGAATGGATTGGCTTGCGAGGCACAAGGCCAAAATTGATTGTAGACAGCAACGGATATTCTTGAGGGGTCCCAAAGGTAATAAGATTACTTACTGTGGGATAGTGATGAAGCCTGGAGTCAACCTCATTTCTTTTAAAAAGGGTCAACCAGTCTATCTTTGTAAATCTTTGACCCTAACCCAAGGAGAAACAACTACACCACAAATTCCCATAGTCTCAGAGTTCCCTGATGTTTTTCCTGAGGAAATCACGGGAATGCCACCTGAAAGAGTAATCAGTTTCCCCATTGATCTGATCCCCGGAGCTTCACCGATTTCAAAGGCACCCTATCGAATGGCGACGACAGAGTTGCAAGAACTCAAGAGGCAGCTAGATGACCTCTTAAGCAAAGGATTCATTACCCAAAGCACATCACCTTGGGGAGCACCTGTTTTATTTGTTCGAAAGAAAGATGGGAGTATGAGGTTATGTATAGATTACAGAGAGCTGAATAAGGTCACAATCAAGAACAAGTATCCACTACCTAGGATTGAGGATCTTTTTGACCAACTTCAAGGAGCTGGAGTATTTTCTAAGATCGACTTACGATCGGGATACCATCAGTTGAGAGTCAGTGAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249848.p1 GENE.S_Transcript_249848~~S_Transcript_249848.p1 ORF type:3prime_partial len:707 (-),score=100.81,RVP_2|PF08284.7|1.6e-32,Retrotrans_gag|PF03732.13|1.4e-13 S_Transcript_249848:3-2120(-)
MCRNKLARRNTIRRDTSSSSGGDMAQETQEQILARMRHVEEILISQRQGGGNYYDKIVKLNPPKYEGGPNPTDLESWINDWETIFTTTECPYDRRITQIDFYLKEEAGDWWREKKPELLATEGFDWAMLIERLRERFYPRALKRKKKAEFESLIQGDMTVAEYASKFIQLSRFAENLVKDEKDKVERFEDGLNFKLQELVSGQCETFSEVLDKTINMERVVDKRKEANSKGKKARETGQQSKEENSSKKFKAGGNSHHGGGSFQKGRGGNSSGGRGNGTGNCRKCGKLYHPRTNCKGEVWECNACGKKGHRAFECWTNPPEGNNGNNNRRGGGNHQGGRNGGNNRSYQGQTQRTFHNNNSNQQQTQQSGTYQPAGNGGTNNHGNQNVQPNPNNNRGRIFVMNRAEAENNPDVVVGTFLAKSLPAYILFDSGASHSFISSAFVHKHNLVPTSECNASIAMPTGMIVNCSRLFENIPINVAGSELPANLIQFDLTGFDIILGMDWLARHKAKIDCRQQRIFLRGPKGNKITYCGIVMKPGVNLISFKKGQPVYLCKSLTLTQGETTTPQIPIVSEFPDVFPEEITGMPPERVISFPIDLIPGASPISKAPYRMATTELQELKRQLDDLLSKGFITQSTSPWGAPVLFVRKKDGSMRLCIDYRELNKVTIKNKYPLPRIEDLFDQLQGAGVFSKIDLRSGYHQLRVSEA

Click here to download the sequence:
Link to NCBI Protein BLAST