Transcript Information: S_Transcript_249996.p1


Annotated TAIR IDAT5G54290.2
Annotated Gene Namecytochrome c biogenesis protein family
Annotated Gene Symbol(s)CcdA
Annotation TypeHomolog
Chromosome Positionchr5:22051097-22053923 | Forward length=355
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 31.855186469948
Condition 2: 8 Hour
Replicate 10.25237148304299
Replicate 20.26475560520386
Replicate 30
Condition 3: 24 Hour
Replicate 10.25851933124963
Replicate 20
Replicate 31.4924286630246


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249996.p1 GENE.S_Transcript_249996~~S_Transcript_249996.p1 ORF type:5prime_partial len:169 (+),score=31.19,DsbD|PF02683.11|1.4e-06 S_Transcript_249996:3-509(+)
AGAAAAAGCATGCCCATAAAAATGATAAATAGAGGTTCAGAGGTAAAGGACTTTCAGCAAGATGTTGGATTGAATTCAAAGATTGATTTGAAGAGCAAGCTTAGTGCTACTACATTTGTTGTAAATTCATTAGCTGTGGCCAATTTTCTTGCAATGGATCCTGCAAATGCTGTGCCTATGAAGGATCTAATGGATGGGGCTGCGTCTGTCTTTATGCTAGCTGATGCTGGGCCTGGAGACTGGTTTGGAGGTCTTTTATATTCTGCTGGACAACAAGCTAATGAAGCTGTTCAAAGCCAGCTAACAGCTCTCAGTTTTACAAGTTTGGCCGTCATTTTTGGGGCAGGGCTAGTAACCAGTCTCTCTCCTTGTACATTGAGTGTTTTGCCATTGACCCTTGGTTACATAGGTAAGGTTTTTTACCCTACACTACACTATGATTGTGGGGTCAAATTACTGACTATTTGCTTCTGCAATTCATTTGAAGCTGATTTACTAAATAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249996.p1 GENE.S_Transcript_249996~~S_Transcript_249996.p1 ORF type:5prime_partial len:169 (+),score=31.19,DsbD|PF02683.11|1.4e-06 S_Transcript_249996:3-509(+)
RKSMPIKMINRGSEVKDFQQDVGLNSKIDLKSKLSATTFVVNSLAVANFLAMDPANAVPMKDLMDGAASVFMLADAGPGDWFGGLLYSAGQQANEAVQSQLTALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGKVFYPTLHYDCGVKLLTICFCNSFEADLLNN*

Click here to download the sequence:
Link to NCBI Protein BLAST