Transcript Information: S_Transcript_249998.p1


Annotated TAIR IDAT5G54290.2
Annotated Gene Namecytochrome c biogenesis protein family
Annotated Gene Symbol(s)CcdA
Annotation TypeOrtholog
Chromosome Positionchr5:22051097-22053923 | Forward length=355
E-Value2.3E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2632757648687
Replicate 22.2645091921203
Replicate 31.0816854007977
Condition 2: 8 Hour
Replicate 10.43776461061563
Replicate 20.52485275401118
Replicate 31.1876865234447
Condition 3: 24 Hour
Replicate 10.76873490289481
Replicate 20
Replicate 30.66568445644001


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249998.p1 GENE.S_Transcript_249998~~S_Transcript_249998.p1 ORF type:5prime_partial len:341 (+),score=70.72,DsbD|PF02683.11|2.4e-32 S_Transcript_249998:2-1024(+)
TTTAGCACCCTGGAGAAAAATCTAATATTGACAATTTGCTTCAAAGTTCCTCTCTCTCTCACTGTCTGCAAAATTTCTACGATGAGTCTGGTTGGTAATTGCAATGCTTTGCCGACTAATCCATTCAGGCTTTCAAGCCACGAACTTTACACCCACAACAACTACAACATGAGAAAAAGCATGCCCATAAAAATGATAAATAGAGGTTCAGAGGTAAAGGACTTTCAGCAAGATGTTGGATTGAATTCAAAGATTGATTTGAAGAGCAAGCTTAGTGCTACTACATTTGTTGTAAATTCATTAGCTGTGGCCAATTTTCTTGCAATGGATCCTGCAAATGCTGTGCCTATGAAGGATCTAATGGATGGGGCTGCGTCTGTCTTTATGCTAGCTGATGCTGGGCCTGGAGACTGGTTTGGAGGTCTTTTATATTCTGCTGGACAACAAGCTAATGAAGCTGTTCAAAGCCAGCTAACAGCTCTCAGTTTTACAAGTTTGGCCGTCATTTTTGGGGCAGGGCTAGTAACCAGTCTCTCTCCTTGTACATTGAGTGTTTTGCCATTGACCCTTGGTTACATAGGTGCATTCGGTTCTGGGAAAAGTAAAGCACAGGTTGTTGGTGATTCAATTGCATTTTCATTAGGTTTGGCCACTACACTAGCACTCCTTGGAGTTGGAGCATCTTTTGCTGGAAAAGCGTATGGACAGATAGGCAGAGGACTGCCTTTGGCTGCTTCAGGTTTAGCTATAGTTATGGGGCTAAATCTTTTGGAGATAGTTGAATTGCAGCTTCCATCATTTTTCAATAATTTTGATCCCCGTGAAGCTGCTGCTAAATTTCCTTCCAGTGTGCAAGCATATTTAGCTGGTCTTACATTTGCATTGGCAGCATCACCCTGCAGCACGCCTGTGCTTGCCACTTTACTTGGTTATGTGGCGTCAACCAAGGTATGCGAAAATTCTTCTGGTTTTGTGAAAAGGTTTTCCCTCTTAGTCAGCACAAAGATGACGTGGGCAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249998.p1 GENE.S_Transcript_249998~~S_Transcript_249998.p1 ORF type:5prime_partial len:341 (+),score=70.72,DsbD|PF02683.11|2.4e-32 S_Transcript_249998:2-1024(+)
FSTLEKNLILTICFKVPLSLTVCKISTMSLVGNCNALPTNPFRLSSHELYTHNNYNMRKSMPIKMINRGSEVKDFQQDVGLNSKIDLKSKLSATTFVVNSLAVANFLAMDPANAVPMKDLMDGAASVFMLADAGPGDWFGGLLYSAGQQANEAVQSQLTALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAQVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGRGLPLAASGLAIVMGLNLLEIVELQLPSFFNNFDPREAAAKFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVASTKVCENSSGFVKRFSLLVSTKMTWAI*

Click here to download the sequence:
Link to NCBI Protein BLAST