Transcript Information: S_Transcript_249999.p1


Annotated TAIR IDAT5G54290.2
Annotated Gene Namecytochrome c biogenesis protein family
Annotated Gene Symbol(s)CcdA
Annotation TypeHomolog
Chromosome Positionchr5:22051097-22053923 | Forward length=355
E-Value5E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6646980765704
Replicate 211.082703591682
Replicate 314.239507859896
Condition 2: 8 Hour
Replicate 117.258687977587
Replicate 219.354250451112
Replicate 317.052678083985
Condition 3: 24 Hour
Replicate 113.716554749908
Replicate 218.447288492376
Replicate 315.485162146397


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_249999.p1 GENE.S_Transcript_249999~~S_Transcript_249999.p1 ORF type:5prime_partial len:215 (+),score=37.39,DsbD|PF02683.11|2.4e-07 S_Transcript_249999:2-646(+)
TTTAGCACCCTGGAGAAAAATCTAATATTGACAATTTGCTTCAAAGTTCCTCTCTCTCTCTGCAAAATTTCTATGATGAGTCTGGTTGGTAATTGCTATGCTTTGCCTACTAATCTATTCAGGCTTTCAAGCCACGAACTTTACACCCACAACAACTACAACATGAGAAAAAGCATGCCCATAAAAATGATAAATAGAGGTTCAGAGGTAAAGGACTTTCAGCAAGATGTTGGATTGAATTCAAAGATTGATTTGAAGAGCAAGCTTAGTGCTACTACATTTGTTGTAAATTCATTAGCTGTGGCCAATTTTCTTGCAATGGATCCTGCAAATGCTGTGCCTATGAAGGATCTAATGGATGGGGCTGCGTCTGTCTTTATGCTAGCTGATGCTGGGCCTGGAGACTGGTTTGGAGGTCTTTTATATTCTGCTGGACAACAAGCTAATGAAGCTGTTCAAAGCCAGCTAACAGCTCTCAGTTTTACAAGTTTGGCCGTCATTTTTGGGGCAGGGCTAGTAACCAGTCTCTCTCCTTGTACATTGAGTGTTTTGCCATTGACCCTTGGTTACATAGGTGCATTCGGTTCTGGGAAAAGTAAAGCACAGGTAATAATTTTCTGGCTGTTTTCTTGTTTGTATTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_249999.p1 GENE.S_Transcript_249999~~S_Transcript_249999.p1 ORF type:5prime_partial len:215 (+),score=37.39,DsbD|PF02683.11|2.4e-07 S_Transcript_249999:2-646(+)
FSTLEKNLILTICFKVPLSLCKISMMSLVGNCYALPTNLFRLSSHELYTHNNYNMRKSMPIKMINRGSEVKDFQQDVGLNSKIDLKSKLSATTFVVNSLAVANFLAMDPANAVPMKDLMDGAASVFMLADAGPGDWFGGLLYSAGQQANEAVQSQLTALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSKAQVIIFWLFSCLYY*

Click here to download the sequence:
Link to NCBI Protein BLAST