Transcript Information: S_Transcript_250017.p1


Annotated TAIR IDAT1G52140.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19407559-19408185 | Reverse length=208
E-Value3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8841062821367
Replicate 21.4643444396581
Replicate 31.0608653499416
Condition 2: 8 Hour
Replicate 11.3210418780525
Replicate 20.98990480706755
Replicate 31.6034044658614
Condition 3: 24 Hour
Replicate 10.77327021205643
Replicate 20.90254116896959
Replicate 31.5624275295205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250017.p1 GENE.S_Transcript_250017~~S_Transcript_250017.p1 ORF type:complete len:226 (+),score=26.06,DUF761|PF05553.7|6.6e-10 S_Transcript_250017:291-968(+)
ATGGAGGTGCATCCAACAAGAAGAAGCTCAACAATCGCAAAGAAGTTATGGAGCTTTTTAAGAGTCACCTTCTTTATGATGAGAAAGGGTTTGATCTCCAAGAAAAAATTCATAATGGATATGAATTTATTCTTCAAGAGAGGTAAGCTCATTGGAAAGAGCGTTACCAATCTTATATCACATCACCATCACCACAACCGCCACCAGATGACTCATTATAGGTCAAACTTTGGCCTACGTGAGTATGAATTTTCTTGTAATAATAGTCCTAACCCCATTTTTTACCATGTTTCGACATCATCCAAGCGAAAACACCACCACCACCTTCATTTGCCTTGCATGAACCCTCCACTCGTTATCGATGAGCTCGAATCTCAATATGATGATGAAAATAACAATAACAATAATAATAATAATGCCATTGTCTTGGTGCCCAAGACACCGGAATATTCCTTCAATCTTTGCTTGGATGGTTATGATCTAGCACCAGGAGAGACCCGTAGCCCTCTCCTTTCTCCATTTCCTAAGAACAAGATTTCGGATTATTCATCCGAGGATGATGAAGAAATCGGTAATAATGGAGGAAATACTCACGTCGACCATGAAGCTGAAGAGTTCATTAACCAGTTCTATGAACAACTAAGAGCTCAAAGCCAGATGCAATTGTTACAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250017.p1 GENE.S_Transcript_250017~~S_Transcript_250017.p1 ORF type:complete len:226 (+),score=26.06,DUF761|PF05553.7|6.6e-10 S_Transcript_250017:291-968(+)
MEVHPTRRSSTIAKKLWSFLRVTFFMMRKGLISKKKFIMDMNLFFKRGKLIGKSVTNLISHHHHHNRHQMTHYRSNFGLREYEFSCNNSPNPIFYHVSTSSKRKHHHHLHLPCMNPPLVIDELESQYDDENNNNNNNNNAIVLVPKTPEYSFNLCLDGYDLAPGETRSPLLSPFPKNKISDYSSEDDEEIGNNGGNTHVDHEAEEFINQFYEQLRAQSQMQLLQY*

Click here to download the sequence:
Link to NCBI Protein BLAST