Transcript Information: S_Transcript_250155.p1


Annotated TAIR IDAT1G53260.1
Annotated Gene NameLOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19859393-19860421 | Reverse length=271
E-Value1.2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7027859789672
Replicate 22.2513050568893
Replicate 31.8819118452654
Condition 2: 8 Hour
Replicate 13.6993024019516
Replicate 25.4788200750351
Replicate 33.0451210864259
Condition 3: 24 Hour
Replicate 13.7894185646949
Replicate 24.6252676686423
Replicate 34.3752526008875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250155.p1 GENE.S_Transcript_250155~~S_Transcript_250155.p1 ORF type:complete len:98 (-),score=19.00 S_Transcript_250155:24-317(-)
ATGTGCTCTTGTTTCATGACAGGGTTGCCTGGTGTTCTTTGGGTCTTGCCTGATTCTTATCTTGATGTGCCAAGTAAAGATTATGGAGGTGATCTGTTCGTTGATGGCAAGGTCATTCGTAGACCACAGTATGACTTTAGCGACAGGCAGCCAAGTAGAAGTAGACCTCGGCCACGGCATGACAGGCGTCATGACAGGGTGCAGAGTGTGCCAAGAGGACCAATGCAGACAACAGATGCAGCATTGGAACCAAGACCAGGCTCAGAATGTGCAGCAACCAATATTAATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250155.p1 GENE.S_Transcript_250155~~S_Transcript_250155.p1 ORF type:complete len:98 (-),score=19.00 S_Transcript_250155:24-317(-)
MCSCFMTGLPGVLWVLPDSYLDVPSKDYGGDLFVDGKVIRRPQYDFSDRQPSRSRPRPRHDRRHDRVQSVPRGPMQTTDAALEPRPGSECAATNINE*

Click here to download the sequence:
Link to NCBI Protein BLAST