Transcript Information: S_Transcript_25033.p1


Annotated TAIR IDAT5G40460.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16202465-16202803 | Forward length=112
E-Value2.4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.350338505085
Replicate 224.079958888488
Replicate 327.506023530399
Condition 2: 8 Hour
Replicate 123.396999662226
Replicate 226.46270096242
Replicate 327.893309151661
Condition 3: 24 Hour
Replicate 129.459385735887
Replicate 222.145781597459
Replicate 325.222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25033.p1 GENE.S_Transcript_25033~~S_Transcript_25033.p1 ORF type:5prime_partial len:175 (+),score=6.53 S_Transcript_25033:1-525(+)
CTCCCGAAACTCCCATATTCACTTTCCCCCAAAAAGAAAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAACTCTCAAGTCTCAACCATGTCCACAGATCTGGAATTATTTCCTGCAAATGTCTCTAATCGTATTGGATCCCAAACAGCTGCCCCCTCAAACGACGTCGCAATGATGGCGGCTTCTTCAGATCCCGAGAACATTAATGGTGGTAGTAATAGTAGTACTACTAGTACTAGTACCAGTACCACTAGAGAAATCAAAATCGAAGACGAAGAAAAATTACAAAAAATCAATCGAGAAAGCCCCAAAACACCAACAGCAGCTGAGCATCGGATCCCGGCCCTTTCGAGCCCGCCGCCCGCCCCCCGTAAACGGCAGCGTGTGGCTGTTAATCCGCCCTGCAAACGCCGCCTCGAGTTCCTCATCCCCGATACCGATCAAGAAATTCAAGATTTCTTCACCTCTAGCTTCGCCAAAATTGAATCTACCCGAATTCTCAAGCGCCGTTGTCCTTGCGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25033.p1 GENE.S_Transcript_25033~~S_Transcript_25033.p1 ORF type:5prime_partial len:175 (+),score=6.53 S_Transcript_25033:1-525(+)
LPKLPYSLSPKKKEKKKKKKKKKNSQVSTMSTDLELFPANVSNRIGSQTAAPSNDVAMMAASSDPENINGGSNSSTTSTSTSTTREIKIEDEEKLQKINRESPKTPTAAEHRIPALSSPPPAPRKRQRVAVNPPCKRRLEFLIPDTDQEIQDFFTSSFAKIESTRILKRRCPCV*

Click here to download the sequence:
Link to NCBI Protein BLAST