Transcript Information: S_Transcript_250355.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61532950832787
Replicate 20.76518345286179
Replicate 30.42642164355146
Condition 2: 8 Hour
Replicate 10
Replicate 20.12931704416027
Replicate 30
Condition 3: 24 Hour
Replicate 10.75762601701483
Replicate 21.5720562943131
Replicate 31.4579216419142


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250355.p1 GENE.S_Transcript_250355~~S_Transcript_250355.p1 ORF type:complete len:173 (+),score=22.72,zf-RVT|PF13966.2|3.2e+03,zf-RVT|PF13966.2|2e-16 S_Transcript_250355:795-1313(+)
ATGGGTCGAATGGTGAAGAAATATTATCTAAAGGAGAGATCTATTTGGGAGATTAAATCTAAACCTAGTGACTCCTGGGCATGGACAAGGCTACTGAAAATTAGGGATGAGTTTGTGCAAAAAGTGGGCTCAGTAGATAAGGCTATCCATCTTACGCACACATGGCAGGCTAGACGAGGAAAAATTGCAACAGAGGCCTATCAGTTGTTCAGAAATCCTACCAGGAAGGTGCGATGGGAGAAGACTGTCCGGGATTCAGCAAATACCCCCAAACATTTTGTTATTGCTGCCTTAGCAATACAGAATGCTCTACCTATAGTTGATAATATGATTAAGTGTGGTATGCAGCTGATAAACAGATGTATCTTATGCAAGCAACAGCAAGAGACTGTACAACATTTGTTCTTTGACTGCTCCCTGTCCAAACAAATATGGCAGAATATAAATACTTGGATGGGAGAAACTCGAAGAGGCAGGAACCTGAAGAAAGAGATTAAATGGTATAGCAGCTGGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250355.p1 GENE.S_Transcript_250355~~S_Transcript_250355.p1 ORF type:complete len:173 (+),score=22.72,zf-RVT|PF13966.2|3.2e+03,zf-RVT|PF13966.2|2e-16 S_Transcript_250355:795-1313(+)
MGRMVKKYYLKERSIWEIKSKPSDSWAWTRLLKIRDEFVQKVGSVDKAIHLTHTWQARRGKIATEAYQLFRNPTRKVRWEKTVRDSANTPKHFVIAALAIQNALPIVDNMIKCGMQLINRCILCKQQQETVQHLFFDCSLSKQIWQNINTWMGETRRGRNLKKEIKWYSSWV*

Click here to download the sequence:
Link to NCBI Protein BLAST