Transcript Information: S_Transcript_250438.p1


Annotated TAIR IDAT5G22450.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7437145-7442856 | Reverse length=1154
E-Value6E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73925003431057
Replicate 26.3328377433607
Replicate 35.8060465448372
Condition 2: 8 Hour
Replicate 14.1466036727759
Replicate 25.5929621599317
Replicate 34.3421171047184
Condition 3: 24 Hour
Replicate 13.0340115959159
Replicate 21.049250535942
Replicate 33.0359868265418


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250438.p1 GENE.S_Transcript_250438~~S_Transcript_250438.p1 ORF type:complete len:108 (-),score=22.82 S_Transcript_250438:304-627(-)
ATGGGTGCTGATGGGGGATCAGGTCCTGTGAGCCGGGGTGGTGTCGTGTCATCATCAGATATGATACCCCCATTACCCCAATGTCTACCTTTGGAGCCAATCTCATTAGGCAGCCAAAAATTTACACGTTCTGGAGAATTGAGGAGAGCTCTGGGCGTTCCTTTAGGAGGTGCTTCTGAAGACCATCCTTTCAGAGTTTCTAGTTATAAGCCTTCACCACCCGTAGCAACTGAAGAGCTAAAGCAATTCAAAGACAATGTTCTAGATGCCTCTATGAAAGCCAAGTCGACAGTAGAGCCAGTTCTTTGTCAAAGGATCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250438.p1 GENE.S_Transcript_250438~~S_Transcript_250438.p1 ORF type:complete len:108 (-),score=22.82 S_Transcript_250438:304-627(-)
MGADGGSGPVSRGGVVSSSDMIPPLPQCLPLEPISLGSQKFTRSGELRRALGVPLGGASEDHPFRVSSYKPSPPVATEELKQFKDNVLDASMKAKSTVEPVLCQRIK*

Click here to download the sequence:
Link to NCBI Protein BLAST