Transcript Information: S_Transcript_2505.p1


Annotated TAIR IDAT1G55740.1
Annotated Gene Nameseed imbibition 1
Annotated Gene Symbol(s)AtSIP1, SIP1
Annotation TypeOrtholog
Chromosome Positionchr1:20835507-20838707 | Reverse length=754
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.469498940247
Replicate 242.717315951784
Replicate 343.065750748408
Condition 2: 8 Hour
Replicate 140.637346176132
Replicate 236.770751221678
Replicate 345.211139534502
Condition 3: 24 Hour
Replicate 158.562879144997
Replicate 255.092350480802
Replicate 360.438994704813


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2505.p1 GENE.S_Transcript_2505~~S_Transcript_2505.p1 ORF type:complete len:752 (+),score=167.69,Raffinose_syn|PF05691.8|1.3e-303 S_Transcript_2505:260-2515(+)
ATGACAATTGGGGCAGGGATTAAGGTGACAGAGAAGAAGCTAGTGGTATTAGGGAATCAAGTGCTCAGCGATGTTCATGACAATGTGATTCTTACACCAGCTCCTGGAGATCTCAATGGAGCTTTCCTTGGAGTTGATTCTGATCGTCTTGGCTCTCGTCGCGTCTTTCCCCTCGGCAAACTCCTGGGGTTGAGATTTATGTGTGTGTTCAGATTCAAGTTATGGTGGATGACACAGAGAATGGGGAATCTTGGGCAAGATATCCCATTTGAGACTCAATTTTTGATGGTGGAAGCAAATGAAGGATCTCCTGTTGCTGATTCCACTGCCGAAAATGAGCCCACCTATGTTGTTTTCTTACCTATTCTTGAGGGCGATTTCAGAGCTGTCCTCCAAGGAAATGCCCAAGATGAGCTCGAGATTTGTTTGGAAAGTGGGTGTCCTGAGGTTGAAGATTTTGATGGAAGTCATTTGGTTTATGTTGCTGGTGGTTCTGATCCTTACGATGTCATCACAGACGCTGTCAAGACTGTGGAGAGACATCTTCAGACATTCTGTCACCGTGATAGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGGTGGTGCACATGGGATGCATTTTACACCAATGTTACTGCAGAGGGAGTTAAGCAGGGTTTAGAAAGCTTGGAAAAGGGTGGCACTCCTCCAAGGTTTGCTATTATTGATGATGGATGGCAGTCAGTCGCCATGGATCCCAATGCTATACCATGTGAAGATGACAATTGTGCCAACTTCGCAAATAGGCTAACGCACATCAAAGAGAATTACAAATTTCAGAAGGATGGGAAAGAAGGGCAAAGAGTGGAGGACGGATTTTGTCATATTATAACTGAAATTAAAGAAGATCATGCCCTCAAGCATGTATATGTCTGGCATGCAATAACAGGTTACTGGGGAGGTGTCAAGCCAGATGTTTCAGAGATGGAGCATTATGAATCCAAGTTGATGTATCCAAAAACACCTCCTGGAGTTCAATTGAATGAACACGTTGAATGTCCTGATAATTCCTTGGAGACCATGTCGAAAAATGGACTTGGGCTTGTGAACCCCGAAAAAGTTTTCAACTTCTATGATGAGCTCCACTCATACCTTGCATCAGCTGGTATTAATGGAGTGAAGGTGGATGTACAAAATATACTTGAAACACTTGGCGCAGGTCATGGTGGAAGAGTCAGTCTTGCCAGAAAGTATCACAGAGCATTAGAGGCTTCTATTGCCAGAAATTTTCCTGATAATGGAATAATATCTTGCATGAGCCACAATACTGATGGTTTGTACAGTGCAAAGAGGGCTGCTGTCATTAGAGCATCAGATGACTTTTGGCCTAGAGATCCAGCATCACACACTATCCACATTGCTTCCGTTGCATATAATACCTTCTTCCTTGGAGAGTTCATGCAGCCAGACTGGGACATGTTTCATAGCTTACACCCTATGGCTGAATACCATGGAGCAGCTCGTGCAGTTGGTGGTTGTGCAATTTATGTGAGTGACAAGCCTGGACACCATGACTTCAATTTGCTGAAAAAGCTTGTACTTCCTGACGGCTCTATATTGAGAGCCAAACTGCCTGGCAGGCCAACTAGGGATTGCTTATTCTCTGATCCTGCAAGAGACGGCAAAAGTCTTCTGAAGATATGGAACATGAATGAGTATACTGGGGTCATCGGGGTATTCAATTGCCAAGGAGCTGGTTGGTGCAAGGTTGGAAAGAGGAACATAGTCCATGACGAGCAACCAGGAACAGTTACTGGCATTGTCCGAGCTCATGATGTAAATTATATAAACAAGATTGCTGACGACAATTGGAGCGGAGATGTTGTTGTATATGCTCATCTTGGGGGAGAGGTTGTATACCTTGCTCAAAATGTGGCCTTGCCAGTTACACTGAAAGCCAAGGAATATGAAATTTTCACCGTGGTTCCTGCAAAGGAGTTGCTAAACGGTGCTGTTTTTGCCCCAATAGGGCTACTTAAGATGTTCAATTCAGGAGGTGCCATTAAGGACTTAAAGTACAAGTCTGGCACCATTAGCTTAAAGGTTCGTGGTTGTGGTGTATTTGGGGCATATTCTTCAATTCAGCCCAAGAGGATTATTGTTGACGATGAAGAAATAGACTTCGAATATGAAGCCAACTCTAGGCTTGTTACTCTCAACTTGAGTACGCCAGAACGAGAGTTGTACCTTTGGAGCATCAACATTGAACTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2505.p1 GENE.S_Transcript_2505~~S_Transcript_2505.p1 ORF type:complete len:752 (+),score=167.69,Raffinose_syn|PF05691.8|1.3e-303 S_Transcript_2505:260-2515(+)
MTIGAGIKVTEKKLVVLGNQVLSDVHDNVILTPAPGDLNGAFLGVDSDRLGSRRVFPLGKLLGLRFMCVFRFKLWWMTQRMGNLGQDIPFETQFLMVEANEGSPVADSTAENEPTYVVFLPILEGDFRAVLQGNAQDELEICLESGCPEVEDFDGSHLVYVAGGSDPYDVITDAVKTVERHLQTFCHRDRKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGTPPRFAIIDDGWQSVAMDPNAIPCEDDNCANFANRLTHIKENYKFQKDGKEGQRVEDGFCHIITEIKEDHALKHVYVWHAITGYWGGVKPDVSEMEHYESKLMYPKTPPGVQLNEHVECPDNSLETMSKNGLGLVNPEKVFNFYDELHSYLASAGINGVKVDVQNILETLGAGHGGRVSLARKYHRALEASIARNFPDNGIISCMSHNTDGLYSAKRAAVIRASDDFWPRDPASHTIHIASVAYNTFFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGHHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNMNEYTGVIGVFNCQGAGWCKVGKRNIVHDEQPGTVTGIVRAHDVNYINKIADDNWSGDVVVYAHLGGEVVYLAQNVALPVTLKAKEYEIFTVVPAKELLNGAVFAPIGLLKMFNSGGAIKDLKYKSGTISLKVRGCGVFGAYSSIQPKRIIVDDEEIDFEYEANSRLVTLNLSTPERELYLWSINIEL*

Click here to download the sequence:
Link to NCBI Protein BLAST