Transcript Information: S_Transcript_2507.p1


Annotated TAIR IDAT5G64200.1
Annotated Gene NameOrtholog of human splicing factor SC35
Annotated Gene Symbol(s)ATSC35, SC35, At-SC35
Annotation TypeHomolog
Chromosome Positionchr5:25681849-25683553 | Reverse length=303
E-Value2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.715358932239
Replicate 223.929640981612
Replicate 323.549955306751
Condition 2: 8 Hour
Replicate 125.426426916582
Replicate 225.383443648921
Replicate 325.988937272227
Condition 3: 24 Hour
Replicate 121.172733229345
Replicate 222.75098008241
Replicate 323.184879280088


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2507.p1 GENE.S_Transcript_2507~~S_Transcript_2507.p1 ORF type:complete len:260 (+),score=36.16,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|6.2e-13,RRM_5|PF13893.2|7.7e-06 S_Transcript_2507:184-963(+)
ATGTCGCACTTTGGGAGATCGGGTCCTCCTGATATCAGAGACACTTACTCTCTCCTCGTCCTCAACATTACCTTCCGGACAACCGCCGATGATTTGTACCCATTGTTCGATCGGTACGGCAAGGTCGTCGATGTCTTCATCCCCCGTGACCGCAGAACCGGTGAATCTCGGGGATTTGCATTTGTTCGTTACAAGTATCAAGATGAGGCTTCCAAGGCTGTCGAGAAGCTTGATGGAAAAGTCGTTGATGGGAGAGAGATTATGGTTCAGTTTGCTAAATATGGTCCCAATGCTGAGCGAATTCACAAGGGAAGAATTTTGGAGCCAGTAAAGTCAAAGGGAAGGTCTAGAAGCCCTCGTCCAAGGCACCGAGATGAATACAGGGACAGGGATTACAGAAGGAGAAGTCGTAGCAGGAGCAGAGATAGATATGACAAGGACAGGTATCGTGGTAGGGGCAGAGATCATCATCGAAGTAGGAGCTACAGTAGAAGCCCTGACTACCGCAAAGACCTTGGTAGAGGAGGATATGATGATGAGAGGCGGAGCCGGAGCCGAAGCCACAGCAGGAGCCGAAGCCGTTCTTACGGAAGTGCCTCTCCTCGTAGAGGTAGCCCCAATCCCAGGAGAAGCCCCTCTCCTAGAAGATCTCCTAGGGCCGAAAGTCCTGATGGACGTGCTAGTGAGAGACGGTCTCCAACTCCGAAGAGTGTTTCACCACATGAACGGCGAGCCGATTACCGCAGTCAGTCTTCTCGTAAATCTGATGGAGATGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2507.p1 GENE.S_Transcript_2507~~S_Transcript_2507.p1 ORF type:complete len:260 (+),score=36.16,RRM_1|PF00076.18|2.8e-20,RRM_6|PF14259.2|6.2e-13,RRM_5|PF13893.2|7.7e-06 S_Transcript_2507:184-963(+)
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDVFIPRDRRTGESRGFAFVRYKYQDEASKAVEKLDGKVVDGREIMVQFAKYGPNAERIHKGRILEPVKSKGRSRSPRPRHRDEYRDRDYRRRSRSRSRDRYDKDRYRGRGRDHHRSRSYSRSPDYRKDLGRGGYDDERRSRSRSHSRSRSRSYGSASPRRGSPNPRRSPSPRRSPRAESPDGRASERRSPTPKSVSPHERRADYRSQSSRKSDGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST