Transcript Information: S_Transcript_250974.p1


Annotated TAIR IDAT2G20000.1
Annotated Gene NameCDC27 family protein
Annotated Gene Symbol(s)HBT, CDC27b
Annotation TypeOrtholog
Chromosome Positionchr2:8632324-8636900 | Reverse length=744
E-Value4.1E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.033514611075
Replicate 20.21420184036422
Replicate 30.53716707039613
Condition 2: 8 Hour
Replicate 11.6563409955055
Replicate 20.43440482795586
Replicate 30.62084993024218
Condition 3: 24 Hour
Replicate 10.2120862474815
Replicate 20.22003700559561
Replicate 31.4692453051524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250974.p1 GENE.S_Transcript_250974~~S_Transcript_250974.p1 ORF type:internal len:103 (-),score=16.87,TPR_11|PF13414.2|3.5e-05,TPR_11|PF13414.2|2e-09,TPR_11|PF13414.2|0.1,TPR_1|PF00515.24|1.4e+03,TPR_1|PF00515.24|1.6e-08,TPR_1|PF00515.24|2.5,TPR_1|PF00515.24|32,TPR_2|PF07719.13|9.8e+03,TPR_2|PF07719.13|5.8e-07,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|9.5e+02,TPR_17|PF13431.2|0.56,TPR_17|PF13431.2|0.034,TPR_17|PF13431.2|0.34,TPR_12|PF13424.2|2.5e-08,TPR_12|PF13424.2|1e+03,TPR_8|PF13181.2|9.8e+03,TPR_8|PF13181.2|0.00045,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|4.1e+02,TPR_16|PF13432.2|0.0011,TPR_16|PF13432.2|0.017,TPR_10|PF13374.2|11,TPR_10|PF13374.2|0.00038,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|0.0029 S_Transcript_250974:2-307(-)
GGAGTACGAAGCTTTCAAAGTGCCCTGAGTGTTGATTCAAGACACTATAATGCGTGGTATGGTCTTGGAATGGTCTACCTTCGGCAAGAGAAGTTTGAATTTGCTGAACATCATTTCCGAACGGCGTTCCAGATCAACCCTCGCTCTTCTGTGATCATGTCATATCTTGGGACAGCTCTGCATGCTCTAAAGAGAAATGAGGAAGCTCTGATGATGATGGAGAGGGCCATCGTGGCTGATAAAAAAAATCCTCTCCCCATGTATCAAAAGGCTATTATATTTTCTAGCATGGACAACTATGATGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250974.p1 GENE.S_Transcript_250974~~S_Transcript_250974.p1 ORF type:internal len:103 (-),score=16.87,TPR_11|PF13414.2|3.5e-05,TPR_11|PF13414.2|2e-09,TPR_11|PF13414.2|0.1,TPR_1|PF00515.24|1.4e+03,TPR_1|PF00515.24|1.6e-08,TPR_1|PF00515.24|2.5,TPR_1|PF00515.24|32,TPR_2|PF07719.13|9.8e+03,TPR_2|PF07719.13|5.8e-07,TPR_2|PF07719.13|1.8,TPR_2|PF07719.13|9.5e+02,TPR_17|PF13431.2|0.56,TPR_17|PF13431.2|0.034,TPR_17|PF13431.2|0.34,TPR_12|PF13424.2|2.5e-08,TPR_12|PF13424.2|1e+03,TPR_8|PF13181.2|9.8e+03,TPR_8|PF13181.2|0.00045,TPR_8|PF13181.2|7.4,TPR_8|PF13181.2|4.1e+02,TPR_16|PF13432.2|0.0011,TPR_16|PF13432.2|0.017,TPR_10|PF13374.2|11,TPR_10|PF13374.2|0.00038,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|0.0029 S_Transcript_250974:2-307(-)
GVRSFQSALSVDSRHYNAWYGLGMVYLRQEKFEFAEHHFRTAFQINPRSSVIMSYLGTALHALKRNEEALMMMERAIVADKKNPLPMYQKAIIFSSMDNYDE

Click here to download the sequence:
Link to NCBI Protein BLAST