Transcript Information: S_Transcript_250980.p1


Annotated TAIR IDAT2G20000.1
Annotated Gene NameCDC27 family protein
Annotated Gene Symbol(s)HBT, CDC27b
Annotation TypeOrtholog
Chromosome Positionchr2:8632324-8636900 | Reverse length=744
E-Value1.2E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4130797116025
Replicate 21.1714755517264
Replicate 30.97926032302304
Condition 2: 8 Hour
Replicate 11.6984824146389
Replicate 21.3858667298946
Replicate 32.4522656536704
Condition 3: 24 Hour
Replicate 10.77327021205643
Replicate 21.8050823379392
Replicate 31.5624275295205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_250980.p1 GENE.S_Transcript_250980~~S_Transcript_250980.p1 ORF type:5prime_partial len:113 (+),score=28.69,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.86,TPR_1|PF00515.24|0.00076,TPR_11|PF13414.2|2.1e+02,TPR_11|PF13414.2|2.1e-05,TPR_12|PF13424.2|3.3e+02,TPR_12|PF13424.2|2.9e-05,TPR_8|PF13181.2|6.4e+02,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|0.0035 S_Transcript_250980:1-339(+)
CTGAAGAGAAATGAGGAAGCTCTGATGATGATGGAGAGGGCCATCGTGGCTGATAAAAAAAATCCTCTCCCCATGTATCAAAAGGCTATTATATTTTCTAGCATGGACAACTATGATGAAGCTCTATGGGTCCTGGAAGAGCTCAAGGAATATGCACCACGTGAATGTATTATCTATGCCTTGATGGGTAAGATTTATAAGCGAAGGAACATGTATGATAAGGCAATGCTTCATTTTGGATTTGCCTTAGACTTGAAGCCATCAGCAACAGATGTTGCTACCATAAAGGCTGCTATTGAGAAATTGCATGTACCAGATGACTTAGATGACAGTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_250980.p1 GENE.S_Transcript_250980~~S_Transcript_250980.p1 ORF type:5prime_partial len:113 (+),score=28.69,TPR_1|PF00515.24|2.2e+03,TPR_1|PF00515.24|0.86,TPR_1|PF00515.24|0.00076,TPR_11|PF13414.2|2.1e+02,TPR_11|PF13414.2|2.1e-05,TPR_12|PF13424.2|3.3e+02,TPR_12|PF13424.2|2.9e-05,TPR_8|PF13181.2|6.4e+02,TPR_8|PF13181.2|3.5,TPR_8|PF13181.2|0.0035 S_Transcript_250980:1-339(+)
LKRNEEALMMMERAIVADKKNPLPMYQKAIIFSSMDNYDEALWVLEELKEYAPRECIIYALMGKIYKRRNMYDKAMLHFGFALDLKPSATDVATIKAAIEKLHVPDDLDDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST