Transcript Information: S_Transcript_251869.p1


Annotated TAIR IDAT5G11780.1
Annotated Gene Nameunknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3793928-3795983 | Forward length=504
E-Value9E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7231439648678
Replicate 21.9047012567639
Replicate 30.53072621823311
Condition 2: 8 Hour
Replicate 12.6081412618076
Replicate 22.2532797191092
Replicate 32.3002713242786
Condition 3: 24 Hour
Replicate 11.2572594814731
Replicate 22.2826860580494
Replicate 30.90726778435669


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_251869.p1 GENE.S_Transcript_251869~~S_Transcript_251869.p1 ORF type:3prime_partial len:139 (-),score=30.74 S_Transcript_251869:3-416(-)
ATGGATGATCATGATGACTCTTTACCTTTTTCGCCGTGCTTTGTGGATTTGGTTAAAGTTTGGACCGTTCGAAGGCGGGAGAGAGAGTTCGGGTTTGATGATGATTTTAGGATATTTTTCCCTATGGTTAATGATGAGGTTCGTAACAGCCTTCTTGCTGGTGATGGTAATGGGGTCGGTTTTCTAGCTGGGGTTGTTATGTGCCAGGCCTTTTTGCTTAGTCTTTGCTTCAAGTTTGGCCTGGAGGAACCACAAATGAAACAGGATGATGATGTTCGGAATTTAGCGGTTAATACCATCACTGGATTTCGGAGTTGTTACTTCTTTGATATTCTTCTGAAGGCGCTATTGGACTCAAGCTTGCCGGTCACCTCCCTGATGAGAACTGTCGATGAAGTGCAGTTGCGAGAAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_251869.p1 GENE.S_Transcript_251869~~S_Transcript_251869.p1 ORF type:3prime_partial len:139 (-),score=30.74 S_Transcript_251869:3-416(-)
MDDHDDSLPFSPCFVDLVKVWTVRRREREFGFDDDFRIFFPMVNDEVRNSLLAGDGNGVGFLAGVVMCQAFLLSLCFKFGLEEPQMKQDDDVRNLAVNTITGFRSCYFFDILLKALLDSSLPVTSLMRTVDEVQLREV

Click here to download the sequence:
Link to NCBI Protein BLAST