Transcript Information: S_Transcript_251987.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value9E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1776717892753
Replicate 23.1283059820357
Replicate 33.3031766119882
Condition 2: 8 Hour
Replicate 12.8646046694656
Replicate 21.5025868489369
Replicate 32.70424932302
Condition 3: 24 Hour
Replicate 12.2823012602113
Replicate 23.0443925998079
Replicate 33.0115873916557


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_251987.p1 GENE.S_Transcript_251987~~S_Transcript_251987.p1 ORF type:3prime_partial len:134 (-),score=11.86,JmjC|PF02373.18|5.5e-23 S_Transcript_251987:3-401(-)
ATGTGTTTTTCCTCGATTCCGTGGACTGGTCAAGAGCATCATTTGTATAAACTGTATTATCTGAACCTGGGTGCTCCCCGAATATGGTATGGAACATCTAAATGTGATCCCTATAAATTTGAGGCAATTATGAAGAAGCCGTTTGCTGATTCTTCAGAAGAACATCTTGAGCAGCGTCATAAACTGGGAAGGCAGGTATGCCCTGCAACATTGAAATCAGAGGATGTACAAGTTTATCGTTGCATTCAGCACCCCAGAGAATTTGTTCTTTTTCTTCCTGGAGCATATTACTCAGGTTTTGATTGCGGCTTCAATTGTTCTGTGTCAGCAGTGTTTGCTCCCTTGAACTGGTTACCTTATGGGCTGAACTCCATAGAACTTTATCGTGAGCGAAGGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_251987.p1 GENE.S_Transcript_251987~~S_Transcript_251987.p1 ORF type:3prime_partial len:134 (-),score=11.86,JmjC|PF02373.18|5.5e-23 S_Transcript_251987:3-401(-)
MCFSSIPWTGQEHHLYKLYYLNLGAPRIWYGTSKCDPYKFEAIMKKPFADSSEEHLEQRHKLGRQVCPATLKSEDVQVYRCIQHPREFVLFLPGAYYSGFDCGFNCSVSAVFAPLNWLPYGLNSIELYRERRM

Click here to download the sequence:
Link to NCBI Protein BLAST