Transcript Information: S_Transcript_251988.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 24.6883427809719
Replicate 33.2274788146301
Condition 2: 8 Hour
Replicate 12.9322411686058
Replicate 22.7964810799658
Replicate 35.3289619012453
Condition 3: 24 Hour
Replicate 12.1844883490594
Replicate 24.5327623152695
Replicate 32.8374799955756


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_251988.p1 GENE.S_Transcript_251988~~S_Transcript_251988.p1 ORF type:3prime_partial len:80 (-),score=2.75,JmjC|PF02373.18|4.1e-07 S_Transcript_251988:3-239(-)
ATGTGTTTTTCCTCGATTCCGTGGACTGGTCAAGAGCATCATTTGTATAAACTGTATTATCTGAACCTGGGTGCTCCCCGAATATGGTATGGAACATCTAAATGTGATCCCTATAAATTTGATGCTATTATGAAGAAGCCGTTTGCAGATTCTTCAGAAGAACATCTTGACCTGCGTCATAAACTGGTAAGTGTCTCGTGTCCCTTTGACTCTGCAGCATGGATAAGAAGGGTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_251988.p1 GENE.S_Transcript_251988~~S_Transcript_251988.p1 ORF type:3prime_partial len:80 (-),score=2.75,JmjC|PF02373.18|4.1e-07 S_Transcript_251988:3-239(-)
MCFSSIPWTGQEHHLYKLYYLNLGAPRIWYGTSKCDPYKFDAIMKKPFADSSEEHLDLRHKLVSVSCPFDSAAWIRRVL

Click here to download the sequence:
Link to NCBI Protein BLAST