Transcript Information: S_Transcript_252065.p1


Annotated TAIR IDAT3G26782.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9850594-9852682 | Forward length=659
E-Value2.5E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48387274973055
Replicate 20.90256866371652
Replicate 30.92213680418003
Condition 2: 8 Hour
Replicate 12.2294726240639
Replicate 22.5422555272417
Replicate 32.0346945441119
Condition 3: 24 Hour
Replicate 11.0922441745297
Replicate 20.82413860277627
Replicate 30.57322828193446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252065.p1 GENE.S_Transcript_252065~~S_Transcript_252065.p1 ORF type:3prime_partial len:220 (+),score=30.44,PPR_2|PF13041.2|2.6e-08,PPR_2|PF13041.2|0.088,PPR_2|PF13041.2|0.00035,PPR|PF01535.16|0.0009,PPR|PF01535.16|0.00031,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|3.2e+03,PPR_1|PF12854.3|0.58,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|0.17 S_Transcript_252065:381-1037(+)
ATGAGGATTCCCCATTATCGCTCAGTAACATCAATCACCAAACATACATATAAAATCCAGACACCCCATTTTCACCATTACTCAACTGTTCCAAACCCCAACCTCTTAAAACTATTCGACAAGTATGTTGACAAATCCAAAGTCCATTCCTGGAACTCCATCATCGCCGAGCTGGCTCGAAGCGGGGACTCTGTTGAAGCGCTTCGAGCCTTCTCGTCGATGCGAAAACTCTCTCTCCTCCCAAACAGGTCAACATTTCCCTGCACCATCAAGGCTTGCTCTGCCCTCTCGGACCTCCGGTCAGGCCGACAGGCCCACCAGCAGGCGTTGGTATTTCTGTATGAATTGGATCTTTTTGTTTCCTCAGCTTTGATTGACATGTACTCCAAATGTGGGCTTTTGAATGATGCACGTAAGTTGTTCGACGAAATTCCTCTGAGAAATGTGGTGTCTTGGACGTCTATGATCACTGGGTATGTTCAGAATGATGACGCTTATGAGGCTTTGGCTCTTTTTAAGGAGTTTTTGGCTGAGGAGGGTGAGAGGGAAGGGGAGGAAGAGGGGTTTGGTATTGATTCGGTTGTTTTGGTTTCGGTGCTATCAGCTTGTGTTAAGGTTTCTAGCAGGTTTTTAACTGAAGGGTTACATAGCTTTTCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252065.p1 GENE.S_Transcript_252065~~S_Transcript_252065.p1 ORF type:3prime_partial len:220 (+),score=30.44,PPR_2|PF13041.2|2.6e-08,PPR_2|PF13041.2|0.088,PPR_2|PF13041.2|0.00035,PPR|PF01535.16|0.0009,PPR|PF01535.16|0.00031,PPR|PF01535.16|4.4e-06,PPR|PF01535.16|1.6e+04,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|0.68,PPR_3|PF13812.2|0.34,PPR_3|PF13812.2|3.2e+03,PPR_1|PF12854.3|0.58,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|0.17 S_Transcript_252065:381-1037(+)
MRIPHYRSVTSITKHTYKIQTPHFHHYSTVPNPNLLKLFDKYVDKSKVHSWNSIIAELARSGDSVEALRAFSSMRKLSLLPNRSTFPCTIKACSALSDLRSGRQAHQQALVFLYELDLFVSSALIDMYSKCGLLNDARKLFDEIPLRNVVSWTSMITGYVQNDDAYEALALFKEFLAEEGEREGEEEGFGIDSVVLVSVLSACVKVSSRFLTEGLHSFS

Click here to download the sequence:
Link to NCBI Protein BLAST