Transcript Information: S_Transcript_25213.p1


Annotated TAIR IDAT5G24350.2
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8301537-8310746 | Forward length=2396
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.468013392716
Replicate 24.5470223867532
Replicate 34.6735401783623
Condition 2: 8 Hour
Replicate 15.2586668183788
Replicate 25.8217039964645
Replicate 35.9657023369194
Condition 3: 24 Hour
Replicate 15.7371285831352
Replicate 25.0525578333798
Replicate 34.9554136962738


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_25213.p1 GENE.S_Transcript_25213~~S_Transcript_25213.p1 ORF type:5prime_partial len:2494 (+),score=451.21,Sec39|PF08314.7|1.2e-09,Sec39|PF08314.7|1.5e-13,Sec39|PF08314.7|3.5e+02 S_Transcript_25213:3-7484(+)
GGGAGAGACAGCGGCCCATCCAAGTCCAACCCAAACAACCCAACATTAACAAAAAAGCCGGTTATTTTAAACTCTCACTGTCACGTGACCGGCAAAAACCATCAACTCCGGTCGTCCGCTCTCCATTCTCGACGGCCGGCGAAATCACACTCCTTTCTCTCTCCTCATTCACCGGCACAGTCGCGGAGGTCTAGGGTTCGAGATCTCGTAATCACAAAAGAAATATCTGAGGTTTCTTCTATGGAGGAAGAAACCTTGGCCGAGGTTCTGTACGAGACACGTCATCACGCTTCTGGTCCTTGTTCCCCGAATTACCCTCCCCGACAGGTCATTGATAATGCCAGTAAGGGAGTCCTATCGCTACTATCAATTCGAGGTTTATCTCAACTTAAAGAGAAATGGATTGGGAATAAACGACCAAAAAAATCAAAGAGGTGGATGTCATTATTTGTATCTCCAAAAGGTGAACGTGTAGCAGTGGCAGTTGGAAATCATGTAACTTTTCTGCGAAAGGATGAGGACTATCAGCTACCATGCGGAATATTTACAAGTAGTGACGTCAATGCATTTACACTTGGAGCATGGTCAGAATCTCACGATGTCCTTGGAGTTGTCGATGATATGGATACACTATACTTCATCAAATCAAATGGTGAAGAAATAGTTAGAATTGAGCAAAGGCATTTAAGATTATCATTTCCGGTTGTAGGCCTTTTTGTGCCTAATGATATAGAGATGAAGAAATCTTACCTGTGTAACTTCAATTTTCTTACTTCAGATGGATCTCTTCATCAACTAGAGATCAGCCAGGATGTTGGGGCTTCTCTCTCATCAATGCGTAGTTGGAGTGACGTTAAGAGGCAGCTACCACTGAATTTTTTCTGTTTAGACTACAATCTGGAACATTCCTTACTTGCTTTAGTTGGTAGTGCTACTGCTATGCTGGCTTCAAGCAGTGGTTCTGGATTGTGTTCTCTCTCTCTATGGCATTGGAGCCAAAACTCGAATTTGCAACAGCTCAGTTCTATAGAGTTTCAGGGTTCTTATAGCAAACCAAAGGGATCCACAGGCCACATGGTACCTCCAAAGGTGCAGATCTCTCCGCATGGAAAATTCATTGGTATCCTTGATTTCCAAGGATGCATGAACATAATTAAGGTGGATCATGAACACTCTTCGCTTTCTGTTATTGCTTGTGGAGGGTGTGTAAACAGAAAACAAACCAGTAACAGAGTTTTTGAGGATGGAGATCTTTTATTTGACATTGTTGACTTCACTTGGTGGTCTGACCATATCTGCGCTATTGCGAAAACGGGTGGTGCCATGACCATGTTTGACGTCATTAATGGCAAAAAGCTACTAGAGAATAATCCTATGTTTTCAGTGCCTCTTGTGGAAAGAACAAATCATCTCTCAGGTGAATTGTTTGTTTTAGATATTCCATTGCTCAAGGAGAGTCTAAATTCTCCTGATAATTCGGAAATAGGATATATTCATGATTTAGAACAGTATAATGAAGGAAATATTGAGCAATTGGAGATATCTAGACTTTCCTGGAGCTTAGTGTCATTCTTGGAGAGATCTGTTCCAGAAATGTATGATGTTCTTATCAATAGTCAGAGCTATCAGTCTGCATTAGACTTTGCTGATCGGTACAAATTGGATAAGGATCAAGTATACAAGTCTCAGTGGGTGAACTCTGAGCAAGGGACAGATGACGTACGTAGGTTTCTATCTAATATCAAGGATGAAGCTTTCATACTTGGTGAATGTGTTGAGAGAGTTCCCCGCACTGAAGATGCAGTCAAAAGTTTACTTGTATTTGGGCTTGACCTGACTAACTGCTACAAGTTTTCTCAACCTGAAGATGATAAATTTGATAATGTCTGGGACTACCGGTTGGCACGACTGCAACTCTTGCAATTCAAGGATAGGCTGGAAACATTCCTTGGCATAAACATGGGCAGGTTTTCTGTGCAGGAATATGGTAAATTCCGTGTGATGCCTCTCCATGAAGCTGCTATTAAACTTGCTGAGAATGGAAAAATTGGAGCCTTGAACCTGTTATTCAAGCGACACCCATTTTCCTTGTCTCCTTTTATTTTGAACATATTGGCTGCTATACCTGAAACAATTCAAGTGCAAACATATAGGCAGCTCCTTCCTGGAAGGTCTCCTCCTTCAAGTAGTGTGCTTCGGGATAGAGATTGGGTCGAATGTGAAGATATGGTGAATTATTTAAGAAGCTTGCCTGATAATGATGGGAGAGCTATGATAGTTAGAACAGAACCCATTATCAAGCAATTGTTGGGAATCTCTTGGCCCTCAACTAATCATATTTTGGTGTGGTACAAGGACAGAGCTCGAGATATTGATAAATTTAGTGGGCAGCTGGAGAATAGCCTCTGTTTACTTGACTATGGTTGCCACAAGGGCATGTATGAATTGCAACCATTTCTTAATGATGTTTCATACTTGCAACAGCTTGTTTATTCTGAAGGTGGTGAGGAGGACATGCATTGTCCTATCAGCCTTATTGAATGGGAAGGTCTATCTGATTATGATAAATTTAGAACTATGCTTAAGGATGTCAAGGAGGAAAATGTTATTGAAAGGCTATGTGTTCGTGCAGTTCCATTCATGCAGAATAAATTGAATGCCTCTTTGGATGGAGAACATCAAAGGGGAGATACATTTATGGTTAGATGGTTGAAGGAGATAGCAGCACAAAACAATATTGAAATATGCTCTGTTGTTATTGATGAATGGTGCCGAGACTCACAATGTGGGTTTTTTACAAATGAGGTAGAAGCTATGGACTGTGCTTTACAGTGCATATACCTTTGTGGTGCTACTGATAGGTGGAATACTATGGCGTCCATTTTATCAAAGCTTCCGATTGGAAGAGGTGTTGAAAATCATTATGGGGTTCTTGAGAAAAGACTCAAACAGGCAGAGGGTCATATTGAAGCAGGCAGACTGTTGGCACTTTACCAGGTCCCGAAACCAGTGAATTTCTTTCTGGAGGCTCATAATGATGATAAGGGTGTAAAACAGATTCTTCGTCTTATACTATCGAAGTTTGCCAGACGCCAACCTGGCCGATCAGACAATGATTGGGCCAGTATGTGGCGTGACTTGCAATGTTTGCAGGAAAAGGCATTTCCGTTTTTGGACCCAGAGTATATGTTGATGGAGTTCTGTAGAGGGCTGCTGAAAGCTGGGAGATTTTCTCTGGCTAGAAACTACTTAAAAGGTATAGGTACAGTCAGTTTGCCAACTGAGAAGGCAGAAAACCTGGTAATTCAAACTGCAAGGGAGTACTTCTTCTCCGCTTCAAGTCTATCCTCCTCAGAGATCTGGAAGGCTAAGGACTGTCTTGACCTCTTCCCAAGCAGCCTAAATGTTAGATTGGAGGCTGATGTCATTGATGCCTTGACAGTTAAACTGCCAAACCTTGGTGTTTATATTCTTCCTGTGCAATATAAGCAAATAAAGGATCCTATGGAAATTATGAAGATGGCTATTACTAATCAGGCTGGTGCATATCTAAACGTTGAAGAACTCATTGATATTGCCAAACTTCTTGGATTACGTTCTCAGGAAGATATATCTGCCGTTCAAGAAGCTATAGCGAGAGAAGCTGCAGTAGCAGGTGATCTACAATTGGCTTTTGATCTATGCCTTGTTTTGGCTAGAAAAGGTCATGGTCATGTTTGGGATCTCTGTGCTGCAATAGCCAGGGGCCCTGCGATTGAGAACATGGATGTTAATTCTAGAAAGCAACTATTAAGCTTTGCATTGTGCCATTGCGATGATGAATCCATTGGTGACTTGTTACTTGCCTGGAAAGATTTGGATATGCAAGGTCAATCTGAGTCTCTGATGATGCTAACTAGTACAACTCCTAACTTTACTGTTCAAGGATCTTCAATTGTTTCACCTTCTAGTCACAGAGCTCAGTCTGCAGTGTCTGCTGGATTTATTGAAGATCAAGAAACACATTTAAGTAAACTTAGAGACATTCTTTCAAAGGTTGCCAAAAACCTCCCTGTGGCCAACGGGTCCAGTTGGGATGATGTCCTCAGGGAGAATGCAAAAGTTCTATCTTTTGCTAGTTTGCAGCTTCCATGGTTAATTGATTTGAGCTGTAATTCAGAATTTGGAAAGAAATTTCATCCAATTTCCGTTCCTGGAAAGCCGTATGTGTCAGTGAGAACCCAGGCTGTAACGACTATCTTGTCTTGGATGGCGAGGAATGGATTTGCTCCAAGAGATGATCTGATCTCCACTCTGGCGAAATCTATTATGGAACCACCAGTTACAGAGGAGGAGGATGTTATGGGTTGTTCGTTCCTTCTTAATCTCATTGATGCTTTTCATGGGGTAGAAGTCATTGAAGAACAGCTGAAGACAAGGGAGGATTACCAAGAAACCTGTAGCATTATGCATGTGGGAATGGCATATAGTTTACTACACAATACTGGTGTTGAGTGTAAGGATCCACTTCAGAGGAGGGAGCTGTTGTTGAGAAAGTTCCAGGAAAGATTTAGTTCAGATGATCTAGATAAAGTTGACAAAGCACAATCCACATTTTGGAGAGGTTGGAAACTGAAACTGGAAGAACAAAAGCGTGCAGCAGATCGTACAAAAATGTTGGAAGAACTAATTCCTGGGGTTGACTCAGCCCTCTTTTTATCTGGGGATTTGTACTACATGAGAAATGTTGTCATGTCCTTTATTGAATCCGTGAAATTGCAGAAGAAAGCTATTTTGAGAGATGTACTCAAAATAGCTGACACATATAGCTTTAATCGTACAGATATAAAACTTATCTGCATCTCTCTGAATGAGCTGACTACCTTCATAATATTTCAGGCCTTATTGAAGTTCCTTAACTGTGCTCTAGTTTCTGAGGTTTGGAGCAATGAGGAAATAGCTGATGAAATTTCGGAATTTAAGGGGGAAATACTTGATTCTGCTGTGGATACTGTCAAAATCTTAGTCTCTGCTGTCTACCCGGAAATTGATGGGTGCAATAAGGGTCGGCTAGCTTATATTTTTTCCCTGCTTTCAGAATGTTACTCCCATCTGGAGGAAAGAAAGGGCTTGCAACCCAACAATGCAGCACATACTCCTGCAAATTTAGGTCATTTTTACAGAATCCTAGAGCATGAATGTTGCCGTGTCTGCTTCATTAAGGATCTGAACTTCAAAAACATTGTTGATGTCAATATAGGAAATCTAAACTTCAAATATTTCAACCATGAAGTCTACAAACATGTTGATGATTTTAGTGTGGAAGCTTTGGCAAAAATGGTTCAAACACTTCTTACTACCTGCACTGGAACAATCCCTGAGAATGTCATATCATGGCAGGATGTGTATAGGCATCATGTTCAGACTACATTGAATAATTTAGAGGAGAGAGCTAGGAAATGCCATCTCCAAAATCCTGAAAGCCTGCAGAACTTGCTAAGTGAACTTGAGCAGAGCTATGATTCCTGCAGAAAGCATATTAGAGTCTTGGAACATCAGGCTGCTTTGGTCATAATGCAGCAGTATTTCACTAGAATTGTTCCGTTGCATGTCTACAGTGGAGGTATACCCAATGATCCAACATGGAAAGACTGTCTTATTGTGCTTCTCAACTTTTGGACAAAATTGATTGATGATTTGCTGGAACATGCCGAGAGCTCCGAAGAGAAGTTCAACACAGGTTGTTTAACGGTTTGCCTCAAAGTTTTCTTGAGGTTAGTTGTGGAGGGAAAAGTTACACCAAGTCAGGGATGGCGCAGTCTTTATTACTATGCTAATCATGGCTTAGTAATTAGTTGTCCTGCTGAAGATTTATATTTCTGTAGGGCAATGGTCATATCCAGATGTGGGTTTAGCGCAGTGGACACATTATTCTCTGAAGCAATTTCACAATGCTTAACTGATGAAACAGCGAGCTCTGACACCAAGGGTGGAATTAAACATTTCCATGATGTTTGTGACTTGTACTTGAATCTCCTGGAAAATATTTTGTCAAACGTAGTTCATGATTCCAGTGAACGACAGAACTTGGGAAACTTACTATCTTCACTCAGTAGATTAGATGGTGACTTGGAAAGTCTGAAGAGGGTTCGAACTGCAATTTGGGAAAGAATAGCCAAGTTTTCTGATAATCTGCAACTTCCTAGTCATGTTCGAGTTTATGTTCTGGAAGTTATGCAATTCATTTTAGGTAGAAATGTGAGGGTTTCAGTGGAGCAGGATGACAATATTATTCCTTGGGATGGATGGGATGAATGGTGTTACAGGAGCAAGGACACTGAACATGCTGCAGAGCACGCTGTGAATGACCAAGCAGATGCATCTAATAGGTTTGAGAATACATTGGTAGCACTGAAGACAACCCAGCTTGCAACTTCAATTTCTTCCCACTTAGAAATCACAGCTGATGATCTTCTTACTGTTGATTCAGCAGTTTCTTGTTTCTCGAAATTGTGTGAAGCAGCTGACACAGAGTCTCAATTTGATGCTCTATTGGCTATCTTGAGGGAGTGGGAGAGCCTCTTTGTGGTGGAGAATAAAGAAGCTCCAGTAGGACAACCAAAAGCATCCGAGACAGGCCTAAGCTGGAGTGATGATTGGGATGAGGGCTGGGAAAGCTTTCATGATGAGGAACCAGCTCCGAAAGATAAGGTCGAATCTTCTCAGTCTATCCATCTTTTGCACACATGTTGGATAGGGATCCTAAAGAAGCTGGTAATGCTATCACGAGTAGATAAAGTGGTGAAATTAATTGACCAATCCTTGGAAAGACCTGATGTGGTGTTGGTTGACGAGGAAGATGCCAGTAACTTGAGCCAAATGTTAATCGGTTCTGATTGCATCACGGCCCTGAAAATAGTACTGATGCTGCCTTATGAAGCCATACAGTTGCGCTGTTTAAATGCAGTTGAAGACAAACTTAAACAAGGAGGTCTCCCAGAGACTACTGATGACCTAGACCTCTTAATTCTTGTTTTGTCATCTGGGATCTGTTCCACTATCATCTCTAAACCTGCATTCGGAGCTATTTTCTCTTATCTCTGCTACTTGGTCGGGAATTTTTCACGCCAGTATCAAGGTGCTCAGCTCTCAAGGATTAGTCAGACTTCTGAACATGAGGGAGAAGAGGAAGAGTTCCTCCTTACTTTCCAAAAACTTCTGCTCCCTTGTTTTGTGTCAGAGCTGGTGAAGTCAGATCAGCAGATCCTAGCCGGATTTCTTGTTACTAAATTCATGCACACAAATCCTTCTCTTTGTCTTATCAATATCGCTGAGGCTGGCCTGAAAAGATACTTGGATAAGCATCTCCAAGTACTAGAAAATCATAACTCTGCTGCTGAAAAGAGGAAACCGGAAATATTTCAACTCACTCTTCTTAGCTTGGAAAGCAAACTGAAGAGTTTGATCAGGTCTGCATTATCATTGCTTGCAAATAGTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_25213.p1 GENE.S_Transcript_25213~~S_Transcript_25213.p1 ORF type:5prime_partial len:2494 (+),score=451.21,Sec39|PF08314.7|1.2e-09,Sec39|PF08314.7|1.5e-13,Sec39|PF08314.7|3.5e+02 S_Transcript_25213:3-7484(+)
GRDSGPSKSNPNNPTLTKKPVILNSHCHVTGKNHQLRSSALHSRRPAKSHSFLSPHSPAQSRRSRVRDLVITKEISEVSSMEEETLAEVLYETRHHASGPCSPNYPPRQVIDNASKGVLSLLSIRGLSQLKEKWIGNKRPKKSKRWMSLFVSPKGERVAVAVGNHVTFLRKDEDYQLPCGIFTSSDVNAFTLGAWSESHDVLGVVDDMDTLYFIKSNGEEIVRIEQRHLRLSFPVVGLFVPNDIEMKKSYLCNFNFLTSDGSLHQLEISQDVGASLSSMRSWSDVKRQLPLNFFCLDYNLEHSLLALVGSATAMLASSSGSGLCSLSLWHWSQNSNLQQLSSIEFQGSYSKPKGSTGHMVPPKVQISPHGKFIGILDFQGCMNIIKVDHEHSSLSVIACGGCVNRKQTSNRVFEDGDLLFDIVDFTWWSDHICAIAKTGGAMTMFDVINGKKLLENNPMFSVPLVERTNHLSGELFVLDIPLLKESLNSPDNSEIGYIHDLEQYNEGNIEQLEISRLSWSLVSFLERSVPEMYDVLINSQSYQSALDFADRYKLDKDQVYKSQWVNSEQGTDDVRRFLSNIKDEAFILGECVERVPRTEDAVKSLLVFGLDLTNCYKFSQPEDDKFDNVWDYRLARLQLLQFKDRLETFLGINMGRFSVQEYGKFRVMPLHEAAIKLAENGKIGALNLLFKRHPFSLSPFILNILAAIPETIQVQTYRQLLPGRSPPSSSVLRDRDWVECEDMVNYLRSLPDNDGRAMIVRTEPIIKQLLGISWPSTNHILVWYKDRARDIDKFSGQLENSLCLLDYGCHKGMYELQPFLNDVSYLQQLVYSEGGEEDMHCPISLIEWEGLSDYDKFRTMLKDVKEENVIERLCVRAVPFMQNKLNASLDGEHQRGDTFMVRWLKEIAAQNNIEICSVVIDEWCRDSQCGFFTNEVEAMDCALQCIYLCGATDRWNTMASILSKLPIGRGVENHYGVLEKRLKQAEGHIEAGRLLALYQVPKPVNFFLEAHNDDKGVKQILRLILSKFARRQPGRSDNDWASMWRDLQCLQEKAFPFLDPEYMLMEFCRGLLKAGRFSLARNYLKGIGTVSLPTEKAENLVIQTAREYFFSASSLSSSEIWKAKDCLDLFPSSLNVRLEADVIDALTVKLPNLGVYILPVQYKQIKDPMEIMKMAITNQAGAYLNVEELIDIAKLLGLRSQEDISAVQEAIAREAAVAGDLQLAFDLCLVLARKGHGHVWDLCAAIARGPAIENMDVNSRKQLLSFALCHCDDESIGDLLLAWKDLDMQGQSESLMMLTSTTPNFTVQGSSIVSPSSHRAQSAVSAGFIEDQETHLSKLRDILSKVAKNLPVANGSSWDDVLRENAKVLSFASLQLPWLIDLSCNSEFGKKFHPISVPGKPYVSVRTQAVTTILSWMARNGFAPRDDLISTLAKSIMEPPVTEEEDVMGCSFLLNLIDAFHGVEVIEEQLKTREDYQETCSIMHVGMAYSLLHNTGVECKDPLQRRELLLRKFQERFSSDDLDKVDKAQSTFWRGWKLKLEEQKRAADRTKMLEELIPGVDSALFLSGDLYYMRNVVMSFIESVKLQKKAILRDVLKIADTYSFNRTDIKLICISLNELTTFIIFQALLKFLNCALVSEVWSNEEIADEISEFKGEILDSAVDTVKILVSAVYPEIDGCNKGRLAYIFSLLSECYSHLEERKGLQPNNAAHTPANLGHFYRILEHECCRVCFIKDLNFKNIVDVNIGNLNFKYFNHEVYKHVDDFSVEALAKMVQTLLTTCTGTIPENVISWQDVYRHHVQTTLNNLEERARKCHLQNPESLQNLLSELEQSYDSCRKHIRVLEHQAALVIMQQYFTRIVPLHVYSGGIPNDPTWKDCLIVLLNFWTKLIDDLLEHAESSEEKFNTGCLTVCLKVFLRLVVEGKVTPSQGWRSLYYYANHGLVISCPAEDLYFCRAMVISRCGFSAVDTLFSEAISQCLTDETASSDTKGGIKHFHDVCDLYLNLLENILSNVVHDSSERQNLGNLLSSLSRLDGDLESLKRVRTAIWERIAKFSDNLQLPSHVRVYVLEVMQFILGRNVRVSVEQDDNIIPWDGWDEWCYRSKDTEHAAEHAVNDQADASNRFENTLVALKTTQLATSISSHLEITADDLLTVDSAVSCFSKLCEAADTESQFDALLAILREWESLFVVENKEAPVGQPKASETGLSWSDDWDEGWESFHDEEPAPKDKVESSQSIHLLHTCWIGILKKLVMLSRVDKVVKLIDQSLERPDVVLVDEEDASNLSQMLIGSDCITALKIVLMLPYEAIQLRCLNAVEDKLKQGGLPETTDDLDLLILVLSSGICSTIISKPAFGAIFSYLCYLVGNFSRQYQGAQLSRISQTSEHEGEEEEFLLTFQKLLLPCFVSELVKSDQQILAGFLVTKFMHTNPSLCLINIAEAGLKRYLDKHLQVLENHNSAAEKRKPEIFQLTLLSLESKLKSLIRSALSLLANSL*

Click here to download the sequence:
Link to NCBI Protein BLAST