Transcript Information: S_Transcript_252195.p1


Annotated TAIR IDAT3G20730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7247095-7248878 | Forward length=564
E-Value1E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13647692941118
Replicate 20.39599878692975
Replicate 30.18915626752411
Condition 2: 8 Hour
Replicate 10.49212439193384
Replicate 20.34418228676502
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.17433701212575
Replicate 30.1940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252195.p1 GENE.S_Transcript_252195~~S_Transcript_252195.p1 ORF type:complete len:390 (+),score=56.21,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|0.0062,PPR|PF01535.16|5.6,PPR|PF01535.16|8.4e-07,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|0.063,PPR|PF01535.16|0.0091,PPR|PF01535.16|19,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2.5e-12,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|0.5,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|4.6e-05,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|28,PPR_1|PF12854.3|12,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|0.041 S_Transcript_252195:1022-2191(+)
ATGTTAATAAAAACTTTTGTATTCACACTTCCAACATTAGATAACCTGAAATGTCTGTTTCTCGCCTTAAAATTACTAGGTATAATACCTGATTGCTATACTTTTGGGAGCTTACTGAGTGCCTGTGCTCAAGGCGTCCATGTCTCCAATGTTAGTCAACTCCACGGGATTATTGTACAGCATGGTTTTGGGTCACATAATATGCTTAACAGACTGTTGATTTCTGTGTATACAAAATGTGGAAGCATGAGACATGCTTATACTGTGTTTAAGAGCATGGTGGTTAAAGATGTAATGTCATACACTGCTATGATTGCTGCATGTGCACATGACAGTGAACATTATATTGAGGCTTTCAATCTCTTTAGTGAAATATTTCGAAGTGGCGAGACACTGGATGACTTTCTACTCTGCACGATGCTTAATGTATGTGCCAACTCGTCTTCACTGATTGTTGGAAGACAAATTCATGCTCTTGCATTGAAGTGTGTGCCTACATATGATGTGGCTATGAGTAATTCACTCATTGATATGTACGCCAAATGTGGAGAACTTGAAGAAGCCGAGTACATTTTTTATCAGATGCAGGAAAGGAATGTTATCTCATGGTCATCCCTAATCAATGGATGTGCCAAACATGGCTATGTAAAAAAAGCGTTTGTATTATACAGGATGATGGAAAGTGAGGGCCACAAACCAAATGATGTTACATTCTTGTCTCTTTTGTTTGCTTGTAGTCATGCAGGATTGACTAAGGAAGGTTGGGAATGCTTTCATAATATGACTGGCAAATACAATATTGCTCCAACTGAAAAACATTATTCATGTATGGTAGATCTCTTTGCTCGTGGTGGCCAGTTAAAAGAAGCAGTAGATCTGATGCAGAATATGAATATCCCATTGACTGCCTCGCTTTGGAGTGCAATTCTTAGCGCTTCTAATGTCTATGGAGATATGTCTCTAGGAAAAGAAGCAGCCAAGTGCCTTCTTGATTTGGATGGTGAAAATTCTGCTCCTTATGTTGCTCTGGCTAGTGCATATGCTGCGGTTGGTTTGTGGGATGATTCCCAGGTGATTCATGAACTTATGGAACTGAAAAAATTGAAAAAGAGCCCTGGCCTCAGTCTTGTCTTGTCACCTGACAAGAGAATAGAAGTGCTGCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252195.p1 GENE.S_Transcript_252195~~S_Transcript_252195.p1 ORF type:complete len:390 (+),score=56.21,PPR|PF01535.16|2.5e+02,PPR|PF01535.16|0.0062,PPR|PF01535.16|5.6,PPR|PF01535.16|8.4e-07,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|0.063,PPR|PF01535.16|0.0091,PPR|PF01535.16|19,PPR_2|PF13041.2|3.3,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|0.00013,PPR_2|PF13041.2|2.5e-12,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|0.5,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|31,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|4.6e-05,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|28,PPR_1|PF12854.3|12,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|6.4e+03,PPR_1|PF12854.3|0.0063,PPR_1|PF12854.3|9.2e-06,PPR_1|PF12854.3|4.5,PPR_1|PF12854.3|0.041 S_Transcript_252195:1022-2191(+)
MLIKTFVFTLPTLDNLKCLFLALKLLGIIPDCYTFGSLLSACAQGVHVSNVSQLHGIIVQHGFGSHNMLNRLLISVYTKCGSMRHAYTVFKSMVVKDVMSYTAMIAACAHDSEHYIEAFNLFSEIFRSGETLDDFLLCTMLNVCANSSSLIVGRQIHALALKCVPTYDVAMSNSLIDMYAKCGELEEAEYIFYQMQERNVISWSSLINGCAKHGYVKKAFVLYRMMESEGHKPNDVTFLSLLFACSHAGLTKEGWECFHNMTGKYNIAPTEKHYSCMVDLFARGGQLKEAVDLMQNMNIPLTASLWSAILSASNVYGDMSLGKEAAKCLLDLDGENSAPYVALASAYAAVGLWDDSQVIHELMELKKLKKSPGLSLVLSPDKRIEVLQG*

Click here to download the sequence:
Link to NCBI Protein BLAST