Transcript Information: S_Transcript_252195.p2


Annotated TAIR IDAT3G20730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7247095-7248878 | Forward length=564
E-Value2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10395703607492
Replicate 20.17236554341808
Replicate 30.28816775130626
Condition 2: 8 Hour
Replicate 10.4165115296315
Replicate 20
Replicate 30.41632514853479
Condition 3: 24 Hour
Replicate 10
Replicate 20.26559154191032
Replicate 30.39409444382994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252195.p2 GENE.S_Transcript_252195~~S_Transcript_252195.p2 ORF type:complete len:256 (+),score=34.37,PPR|PF01535.16|34,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.35,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|7e+02,PPR|PF01535.16|0.0083,PPR|PF01535.16|4e-06,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|1.7e-11,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.92,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1e+04 S_Transcript_252195:230-997(+)
ATGGGTAGATTAGATGAAGCTTTCAAGCTCTTTTTCAGAAACCCAATTCCTTCGGACACATCGTTTTACTTAAAATTACTAGATCTATGCATCGAAGCAAGAGCCAACAAACATGGCCGTCTAATTCATGCACACCTGTTCTATAATGGTTTTGAATCAAATTTGACATTGAATACCAAAATGATCATATTCTATAGCAAAGTTTGTGACATGGGTAATGCTCACAAGGTGTTTGATAAAATGCCTGAACGAAATATTGTATCTTGGACTGCCTTGTTATCTGGGTACTCCCAAAATGGGTTCTTTAAGGATGCCCTGATGGTTTTTCAGAATATGCATCATTCAGGGTTGAAGTGTAATCAGTTTACTTATGGCAGTGCCTTGAGGGCATGTACCAAGTTGATGTGTCTAAGGAGCGGAAAACAAATACAAGGGTGTTTGCAAAAGAGTAGGTTTGTTGGTAATGTGTTTGTGCAGAGTGCATTGGTTGACCTCCATTCCAAGTGCGGAGATATAGAGGATGCTAGTTATGTCTTTAAGATGATGCATGAGAGGGATTTGGTTTGCTGGAATGCTATGATTGGTGGATATTCTGTTCAAGGGTTTCCAAATTATGCATTTGGAGTCTTCCAGTCTATGCTTAGAGAAGGTGAGGTTAAGTTGCTTACTAATCTTTTTCCTTTTGAACTACTTGATGTTGTTGAACTTTTGAGACCATTGCTTGATGCATTTTTAAGTTGGAAAAGTATTGGGTGCATCTTATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252195.p2 GENE.S_Transcript_252195~~S_Transcript_252195.p2 ORF type:complete len:256 (+),score=34.37,PPR|PF01535.16|34,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.35,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|7e+02,PPR|PF01535.16|0.0083,PPR|PF01535.16|4e-06,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|1.7e-11,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|0.0012,PPR_1|PF12854.3|2.2,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.92,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.05,PPR_3|PF13812.2|2.2e+03,PPR_3|PF13812.2|0.06,PPR_3|PF13812.2|23,PPR_3|PF13812.2|1e+04 S_Transcript_252195:230-997(+)
MGRLDEAFKLFFRNPIPSDTSFYLKLLDLCIEARANKHGRLIHAHLFYNGFESNLTLNTKMIIFYSKVCDMGNAHKVFDKMPERNIVSWTALLSGYSQNGFFKDALMVFQNMHHSGLKCNQFTYGSALRACTKLMCLRSGKQIQGCLQKSRFVGNVFVQSALVDLHSKCGDIEDASYVFKMMHERDLVCWNAMIGGYSVQGFPNYAFGVFQSMLREGEVKLLTNLFPFELLDVVELLRPLLDAFLSWKSIGCILC*

Click here to download the sequence:
Link to NCBI Protein BLAST