Transcript Information: S_Transcript_252198.p1


Annotated TAIR IDAT3G20730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7247095-7248878 | Forward length=564
E-Value3E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.067264602309496
Replicate 30
Condition 2: 8 Hour
Replicate 10.065016433893698
Replicate 21.0231028341338
Replicate 30
Condition 3: 24 Hour
Replicate 10.13320050908899
Replicate 20.20729095953976
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252198.p1 GENE.S_Transcript_252198~~S_Transcript_252198.p1 ORF type:complete len:328 (+),score=59.54,PPR|PF01535.16|45,PPR|PF01535.16|0.49,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.0078,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.4,PPR|PF01535.16|15,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|33,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|19,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|70,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|22 S_Transcript_252198:230-1213(+)
ATGGGTAGATTAGATGAAGCTTTCAAGCTCTTTTTCAGAAACCCAATTCCTTCGGACACATCGTTTTACTTAAAATTACTAGATCTATGCATCGAAGCAAGAGCCAACAAACATGGCCGTCTAATTCATGCACACCTGTTCTATAATGGTTTTGAATCAAATTTGACATTGAATACCAAAATGATCATATTCTATAGCAAAGTTTGTGACATGGGTAATGCTCACAAGGTGTTTGATAAAATGCCTGAACGAAATATTGTATCTTGGACTGCCTTGTTATCTGGGTACTCCCAAAATGGGTTCTTTAAGGATGCCCTGATGGTTTTTCAGAATATGCATCATTCAGGGTTGAAGTGTAATCAGTTTACTTATGGCAGTGCCTTGAGGGCATGTACCAAGTTGACGTGTCTAAGGAGCGGGAAACAAATACAAGCGTGTTTGCAAAAGAGTAGGTTTGTTGGTAATGTGTTTGTGCAGACTGCATTGGTTGACCTGCATTCCAAGTGTGGAGATATAGAGGATGCTAGTTATGTCTTTAAGATGATGCATGAGAGGGATTTGGTTTGCTGGAATGCTATGATTGGTGGATATTCTGTTCAAGGGTTTCCAAATTATGCATTTGGAGTCTTCCAGTCTATGCTTAGAGAAGATCTCTTTGCTCGTGGTGGCCAGTTAAAAGAAGCAGTAGATCTGATGCAGAATATGAATATCCCATTGACTGCCTCGCTTTGGAGTGCAATTCTTAGCGCTTCTAATGTCTATGGAGATATGTCTCTAGGAAAAGAAGCAGCCAAGTGCCTTCTTGATTTGGATGGTGAAAATTCTGCTCCTTATGTTGCTCTGGCTAGTGCATATGCTGCGGTTGGTTTGTGGGATGATTCCCAGGTGATTCATGAACTTATGGAACTGAAAAAATTGAAAAAGAGCCCTGGCCTCAGTCTTGTCTTGTCACCTGACAAGAGAATAGAAGTGCTGCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252198.p1 GENE.S_Transcript_252198~~S_Transcript_252198.p1 ORF type:complete len:328 (+),score=59.54,PPR|PF01535.16|45,PPR|PF01535.16|0.49,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.0078,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|7.4,PPR|PF01535.16|15,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|2.5e-11,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|0.0033,PPR_2|PF13041.2|33,PPR_1|PF12854.3|2.9,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|2.4e+03,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|19,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|0.071,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.033,PPR_3|PF13812.2|70,PPR_3|PF13812.2|5e+03,PPR_3|PF13812.2|22 S_Transcript_252198:230-1213(+)
MGRLDEAFKLFFRNPIPSDTSFYLKLLDLCIEARANKHGRLIHAHLFYNGFESNLTLNTKMIIFYSKVCDMGNAHKVFDKMPERNIVSWTALLSGYSQNGFFKDALMVFQNMHHSGLKCNQFTYGSALRACTKLTCLRSGKQIQACLQKSRFVGNVFVQTALVDLHSKCGDIEDASYVFKMMHERDLVCWNAMIGGYSVQGFPNYAFGVFQSMLREDLFARGGQLKEAVDLMQNMNIPLTASLWSAILSASNVYGDMSLGKEAAKCLLDLDGENSAPYVALASAYAAVGLWDDSQVIHELMELKKLKKSPGLSLVLSPDKRIEVLQG*

Click here to download the sequence:
Link to NCBI Protein BLAST