Transcript Information: S_Transcript_252199.p1


Annotated TAIR IDAT3G20730.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:7247095-7248878 | Forward length=564
E-Value2.6E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13765345466473
Replicate 20.19019646170271
Replicate 30.12719128333518
Condition 2: 8 Hour
Replicate 10.11030374301965
Replicate 20.46286583392538
Replicate 30.95553799608537
Condition 3: 24 Hour
Replicate 10.22598155335097
Replicate 20
Replicate 30.17394513382839


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252199.p1 GENE.S_Transcript_252199~~S_Transcript_252199.p1 ORF type:complete len:580 (+),score=90.53,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|5.6,PPR_2|PF13041.2|6.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.79,PPR|PF01535.16|87,PPR|PF01535.16|0.99,PPR|PF01535.16|7.7e-07,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|9.2,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|0.015,PPR|PF01535.16|31,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.066,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|49,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|8.1e-05,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|6,PPR_3|PF13812.2|46 S_Transcript_252199:230-1969(+)
ATGGGTAGATTAGATGAAGCTTTCAAGCTCTTTTTCAGAAACCCAATTCCTTCGGACACATCGTTTTACTTAAAATTACTAGATCTATGCATCGAAGCAAGAGCCAACAAACATGGCCGTCTAATTCATGCACACCTGTTCTATAATGGTTTTGAATCAAATTTGACATTGAATACCAAAATGATCATATTCTATAGCAAAGTTTGTGACATGGGTAATGCTCACAAGGTGTTTGATAAAATGCCTGAACGAAATATTGTATCTTGGACTGCCTTGTTATCTGGGTACTCCCAAAATGGGTTCTTTAAGGATGCCCTGATGGTTTTTCAGAATATGCATCATTCAGGGTTGAAGTGTAATCAGTTTACTTATGGCAGTGCCTTGAGGGCATGTACCAAGTTGATGTGTCTAAGGAGCGGAAAACAAATACAAGGGTGTTTGCAAAAGAGTAGGTTTGTTGGTAATGTGTTTGTGCAGAGTGCATTGGTTGACCTCCATTCCAAGTGCGGAGATATAGAGGATGCTAGTTATGTCTTTAAGATGATGCATGAGAGGGATTTGGTTTGCTGGAATGCTATGATTGGTGGATATTCTGTTCAAGGGTTTCCAAATTATGCATTTGGAGTCTTCCAGTCTATGCTTAGAGAAGGTATAATACCTGATTGCTATACTTTTGGGAGCTTACTGAGTGCCTGTGCTCAAGGCGTCCATGTCTCCAATGTTAGTCAACTCCACGGGATTATTGTACAGCATGGTTTTGGGTCACATAATATGCTTAACAGACTGTTGATTTCTGTGTATACAAAATGTGGAAGCATGAGACATGCTTATACTGTGTTTAAGAGCATGGTGGTTAAAGATGTAATGTCATACACTGCTATGATTGCTGCATGTGCACATGACAGTGAACATTATATTGAGGCTTTCAATCTCTTTAGTGAAATATTTCGAAGTGGCGAGACACTGGATGACTTTCTACTCTGCACGATGCTTAATGTATGTGCCAACTCGTCTTCACTGATTGTTGGAAGACAAATTCATGCTCTTGCATTGAAGTGTGTGCCTACATATGATGTGGCTATGAGTAATTCACTCATTGATATGTACGCCAAATGTGGAGAACTTGAAGAAGCCGAGTACATTTTTTATCAGATGCAGGAAAGGAATGTTATCTCATGGTCATCTCTAATCAATGGATGTGCCAAGCATGGCTATGTGAACAAAGCGTTTGTATTATACAGGATGATGGAAAGTGAGGGCCACAAACCAAATGATGTTACATTCTTGTCTCTTTTGTTTGCTTGTAGTCATGCAGGATTGACTAAGGAAGGTTGGGAATGCTTTCATAATATGACTGGCAAATACAATATTGCTCCAACTGAAAAACATTATTCATGTATGGTAGATCTCTTTGCTCGTGGTGGCCAGTTAAAAGAAGCAGTAGATCTGATGCAGAATATGAATATCCCATTGACTGCCTCGCTTTGGAGTGCAATTCTTAGCGCTTCTAATGTCTATGGAGATATGTCTCTAGGAAAAGAAGCAGCCAAGTGCCTTCTTGATTTGGATGGTGAAAATTCTGCTCCTTATGTTGCTCTGGCTAGTGCATATGCTGCGGTTGGTTTGTGGGATGATTCCCAGGTGATTCATGAACTTATGGAACTGAAAAAATTGAAAAAGAGCCCTGGCCTCAGTCTTGTCTTGTCACCTGACAAGAGAATAGAAGTGCTGCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252199.p1 GENE.S_Transcript_252199~~S_Transcript_252199.p1 ORF type:complete len:580 (+),score=90.53,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|4.9,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.63,PPR_2|PF13041.2|6.4e-10,PPR_2|PF13041.2|5.6,PPR_2|PF13041.2|6.1e-05,PPR_2|PF13041.2|0.00018,PPR_2|PF13041.2|4.7e-12,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|0.79,PPR|PF01535.16|87,PPR|PF01535.16|0.99,PPR|PF01535.16|7.7e-07,PPR|PF01535.16|2.3e+03,PPR|PF01535.16|0.024,PPR|PF01535.16|3.8e-06,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|9.2,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.1,PPR|PF01535.16|0.015,PPR|PF01535.16|31,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|2.7e+02,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|4.5e+03,PPR_1|PF12854.3|28,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|15,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|1.4e-05,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.066,PPR_3|PF13812.2|8.1e+03,PPR_3|PF13812.2|1.3e+03,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|5.8e+03,PPR_3|PF13812.2|0.18,PPR_3|PF13812.2|17,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|49,PPR_3|PF13812.2|0.0091,PPR_3|PF13812.2|8.1e-05,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|6,PPR_3|PF13812.2|46 S_Transcript_252199:230-1969(+)
MGRLDEAFKLFFRNPIPSDTSFYLKLLDLCIEARANKHGRLIHAHLFYNGFESNLTLNTKMIIFYSKVCDMGNAHKVFDKMPERNIVSWTALLSGYSQNGFFKDALMVFQNMHHSGLKCNQFTYGSALRACTKLMCLRSGKQIQGCLQKSRFVGNVFVQSALVDLHSKCGDIEDASYVFKMMHERDLVCWNAMIGGYSVQGFPNYAFGVFQSMLREGIIPDCYTFGSLLSACAQGVHVSNVSQLHGIIVQHGFGSHNMLNRLLISVYTKCGSMRHAYTVFKSMVVKDVMSYTAMIAACAHDSEHYIEAFNLFSEIFRSGETLDDFLLCTMLNVCANSSSLIVGRQIHALALKCVPTYDVAMSNSLIDMYAKCGELEEAEYIFYQMQERNVISWSSLINGCAKHGYVNKAFVLYRMMESEGHKPNDVTFLSLLFACSHAGLTKEGWECFHNMTGKYNIAPTEKHYSCMVDLFARGGQLKEAVDLMQNMNIPLTASLWSAILSASNVYGDMSLGKEAAKCLLDLDGENSAPYVALASAYAAVGLWDDSQVIHELMELKKLKKSPGLSLVLSPDKRIEVLQG*

Click here to download the sequence:
Link to NCBI Protein BLAST