Transcript Information: S_Transcript_252500.p1


Annotated TAIR IDAT3G04760.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1303884-1305692 | Reverse length=602
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.32208451908781
Replicate 30.67309255779564
Condition 2: 8 Hour
Replicate 11.2452782666939
Replicate 20.81649082626739
Replicate 30.31118025700703
Condition 3: 24 Hour
Replicate 10.15945170431091
Replicate 20.16542928157918
Replicate 30.92051256952978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252500.p1 GENE.S_Transcript_252500~~S_Transcript_252500.p1 ORF type:internal len:137 (+),score=27.05,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|14,PPR_2|PF13041.2|40,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|3.1e-11,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|93,PPR|PF01535.16|0.56,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|0.15,PPR|PF01535.16|22,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|2.2e+03 S_Transcript_252500:1-408(+)
GAGAAGATGTGGAGTGAAGCTTTTCAGGTTTTTAGTGAGATGGAAAGTGTTAGGTGTGAACCAAATGTGATAACATACACGGCGTTGGTAAAGTTTCTTTGTGAGGATGGAAGGATTAAGGAAGCTTTGGACATTCTTGCTAAGATGGAGAGAGCAAGTTGTGAACCGGATTTGGTGACCTTTAATATTCTTCTCCGTGAACTTTCTCACCTGGACATGAGAGATAAAATTGTTGAACTTCTTTCTCTTATGGATCAGAAAGGGTTGTCATCTGACTCGTATATGCTCACTGCCTTGGCTGGAGGCATGTTAAAGAGAGGGAAACTAGGAGAAGCTAACAAATTGTTGCTTAATGCTATTACGTACGGATACAATGTGGACATTGCTGTTTATAACATGTATTTAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252500.p1 GENE.S_Transcript_252500~~S_Transcript_252500.p1 ORF type:internal len:137 (+),score=27.05,PPR_2|PF13041.2|2.6e-09,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|14,PPR_2|PF13041.2|40,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|3.1e-11,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|93,PPR|PF01535.16|0.56,PPR|PF01535.16|3.1e-05,PPR|PF01535.16|0.15,PPR|PF01535.16|22,PPR_3|PF13812.2|4,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|2.2e+03 S_Transcript_252500:1-408(+)
EKMWSEAFQVFSEMESVRCEPNVITYTALVKFLCEDGRIKEALDILAKMERASCEPDLVTFNILLRELSHLDMRDKIVELLSLMDQKGLSSDSYMLTALAGGMLKRGKLGEANKLLLNAITYGYNVDIAVYNMYLN

Click here to download the sequence:
Link to NCBI Protein BLAST