Transcript Information: S_Transcript_252501.p1


Annotated TAIR IDAT1G09900.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3218133-3219929 | Forward length=598
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235769705839
Replicate 20
Replicate 30.28373440128616
Condition 2: 8 Hour
Replicate 10.49212439193384
Replicate 20.68836457353005
Replicate 30.49190417549957
Condition 3: 24 Hour
Replicate 10.84018782656131
Replicate 21.0460220727545
Replicate 30.1940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252501.p1 GENE.S_Transcript_252501~~S_Transcript_252501.p1 ORF type:internal len:130 (+),score=25.32,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|7e-15,PPR_2|PF13041.2|34,PPR_2|PF13041.2|58,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.8e-11,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|13,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.6e+02,PPR|PF01535.16|0.52,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|7 S_Transcript_252501:1-387(+)
GAGAAGATGTGGAGTGAAGCTTTTCAGGTTTTTAGTGAGATGGAAAGTGTTAGGTGTGAACCAAATGTGATAACATACACGGCGTTGGTAAAGTTTCTTTGTGAGGATGGAAGGATTAAGGAAGCTTTGGACATTCTTGCTAAGATGGAGCGAACAAGTTGTGAACCGGATTTGGTGACCTTTAATATTCTTCTCTGTGAACTTTCTCTCCTGGACACGAGAGATAAAATTAATGAGCTGCTTTCTCTTATGGATCAGAAAGGATTGTCACCTGGCTCGTATATGCTCACTGCCTTGGCTGGAGGCATGTTAAAGAGAGGGAAACTAGGAGAAGCTAACAAATTGTTGCGTCATGCTATTACGTTCGGATACAATGTGGACATTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252501.p1 GENE.S_Transcript_252501~~S_Transcript_252501.p1 ORF type:internal len:130 (+),score=25.32,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|7e-15,PPR_2|PF13041.2|34,PPR_2|PF13041.2|58,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|2.8e-11,PPR_1|PF12854.3|0.026,PPR_1|PF12854.3|13,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|2.6e+02,PPR|PF01535.16|0.52,PPR|PF01535.16|6.9e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|7 S_Transcript_252501:1-387(+)
EKMWSEAFQVFSEMESVRCEPNVITYTALVKFLCEDGRIKEALDILAKMERTSCEPDLVTFNILLCELSLLDTRDKINELLSLMDQKGLSPGSYMLTALAGGMLKRGKLGEANKLLRHAITFGYNVDIA

Click here to download the sequence:
Link to NCBI Protein BLAST