Transcript Information: S_Transcript_252557.p4


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24415597463468
Replicate 20.2024109133717
Replicate 30
Condition 2: 8 Hour
Replicate 10.39129156545198
Replicate 20.41049263559131
Replicate 30.58667470472426
Condition 3: 24 Hour
Replicate 10.20041177514307
Replicate 20.41584975369445
Replicate 30.92557961119692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252557.p4 GENE.S_Transcript_252557~~S_Transcript_252557.p4 ORF type:complete len:109 (+),score=19.17 S_Transcript_252557:1032-1358(+)
ATGTCTGGAGTACGATCATTGTTTCGAGAGCTTGATGAGTCTCGGAAAAGTGAAGTGCGCCTTGGAGACGGCAAGCCAATGCAAGTGGCAGGCATGGGTAAAATTGCTATCAAGACAGTGCAAGGTGGTATGAAACTTCTTTATGATGTGCAGTTTGTTCCTAACTTAGCCCACAATTTGTTAAGTGTAGGACAACTTTTGATGAATGGATACAAAGTGGTGTTTGATGGTAATTTGTGTGATGTGATTGATAAAAAAATATGGTCATGCTATAGTGAGAGTCTCTATGACACCAAACAAAATGTTTCCCCTCAATGTGTCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252557.p4 GENE.S_Transcript_252557~~S_Transcript_252557.p4 ORF type:complete len:109 (+),score=19.17 S_Transcript_252557:1032-1358(+)
MSGVRSLFRELDESRKSEVRLGDGKPMQVAGMGKIAIKTVQGGMKLLYDVQFVPNLAHNLLSVGQLLMNGYKVVFDGNLCDVIDKKIWSCYSESLYDTKQNVSPQCVK*

Click here to download the sequence:
Link to NCBI Protein BLAST