Transcript Information: S_Transcript_252817.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53763638858951
Replicate 20.11142823008846
Replicate 30.18629026347071
Condition 2: 8 Hour
Replicate 10.86163193200537
Replicate 20.11298913454407
Replicate 30.21531159196951
Condition 3: 24 Hour
Replicate 10.44131077758776
Replicate 20.45785477932015
Replicate 30.1273840626521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_252817.p1 GENE.S_Transcript_252817~~S_Transcript_252817.p1 ORF type:complete len:198 (+),score=11.83,RVT_1|PF00078.23|4.7e-20 S_Transcript_252817:701-1294(+)
ATGAGTATTCTTAATGATCATGCTTTCCCTGACGATATTAATCATACCCATGTTGTCCTCATCCCCAAGAAAAAGAAACCTGAATATATTGCCGATTTTAGTCCGATTAGCCTTTGTAATGTCATTTTCAAAATAGCTACAAAGACCCCAGCTAATAGACTTAAGCTAATCTTACCTAACATCATATCTCCTAATCAAAGTGCTTTTACATCGGGAAGAATGATCAATGACAATATACTCATCGCTTTTGAGGTGTTCCACTCTATGCACTATAGTAACACAGTAAATGGTAGCATGGCCCTCAAAATCGATATCAGTAAAGCTTATGATAGGGTGGAATGGATCTTTCTTGAAAGGCTTATGCTCAAAATGGGGTTTGATGAGGGGTGGGCCAAGATTGTCATGAAATGTGTTGAGACGGTCTCTCACTTTTTTGTGGTTAATGGGGATCCCCAAGGCCATCTTAAACCCTATAGGGGTTACGCCAAGGGGACCCAATTCTCCTTACTTATTTCTCTTATGTGTAGAGGGGCTGTCGGGTATGCTCTCGGGGGCGGTGGCTCAAGGCAATTTCAGGGGCCACAAAATTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_252817.p1 GENE.S_Transcript_252817~~S_Transcript_252817.p1 ORF type:complete len:198 (+),score=11.83,RVT_1|PF00078.23|4.7e-20 S_Transcript_252817:701-1294(+)
MSILNDHAFPDDINHTHVVLIPKKKKPEYIADFSPISLCNVIFKIATKTPANRLKLILPNIISPNQSAFTSGRMINDNILIAFEVFHSMHYSNTVNGSMALKIDISKAYDRVEWIFLERLMLKMGFDEGWAKIVMKCVETVSHFFVVNGDPQGHLKPYRGYAKGTQFSLLISLMCRGAVGYALGGGGSRQFQGPQNL*

Click here to download the sequence:
Link to NCBI Protein BLAST