Transcript Information: S_Transcript_253407.p1


Annotated TAIR IDAT1G67790.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25417542-25420099 | Reverse length=576
E-Value1.2E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1150698841556
Replicate 20.86279065308717
Replicate 30.36061215805923
Condition 2: 8 Hour
Replicate 11.0126581994169
Replicate 20.68740317049439
Replicate 31.0717465276248
Condition 3: 24 Hour
Replicate 10.48815382101886
Replicate 20.82298757120815
Replicate 30.63407374202806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253407.p1 GENE.S_Transcript_253407~~S_Transcript_253407.p1 ORF type:complete len:358 (+),score=49.65,SEO_C|PF14577.2|2.2e-65 S_Transcript_253407:497-1570(+)
ATGTTAATTTCAAGACCAGAGCTCCTGACCGTTGATGAATGGCTTTTTCTGGTTCATCAAACATATGATCACCCTCTGCATGATCAGCTAGATGGAGAATATGATATTCTGTGGATGCCAATCTCACCTTCTGAGAAATGGAGTAACAAGGAAGTAAAAATCTTTAATTTTTTGTCGAACTCCTTACCATGGTACTCAATTCAACAGCCATGGTCTCTCAGTTCAATAACTATCAAGTACGCAAAAGAGGAGTGGCAATTCAAAGAAAAACCAATTATGGTTGTCTTGGACTTCATTGGAAGGGTTACTAATGTAAATGCCTCTGACATGGTATCGATCTGGGGTGCGAAAGCATACCCCTTTTCAACAACAAGAGAAAAGGAGCTGTGGAAGGAAGAGAAATGGAATCTCCCACTCTTGTTTGGCACTATTGACCCCTTGTTGACTATGTGGGTCGAAGAAGGAAGAACAATTTGCATCTACGGAAGCAACAAACTTGATTGGGTAAGAGAGTTCACTGAAAAGATCAAGGATATTCAGTATTTAGTTTCAAAATTTGAGATCGTTTATGTTGGTAAGAAAGACCGAGATGAACTTGCCAAAATAGTCTCAGTCATAGACAAAGAGAAGCTAAGCCATTCTCTCTCTTTGAACAAGATATATTTCTTTTGGCGTCGTCTTGAGAGTATTAGAAGATCAAAACTCAGGCTCGGAGTCGGACAGAGCACCGACACTGAACAGATCCTAAAGCAGATAGAAACACTGCTAGCTACCAGTTCAGCAGGCACAGCTGAAGACTGGGCCATTATTGCCACGGGTTCTTCTACAAATATGGTAAAGCTTCAAGGAAAAGAGGGGGACAAGTTCTTGGGTCAGTTCCCAAAATGCCAAAAGTATATGGCAAAAGTTGGACTAGAAGATGCTATCAGACTTTGCCTGGAACCACCTGCAACTAAGCCATGCTCTCATTCAAGAATCATTAAATACAATGAAAGGCCAATAGAAGGAACATCACTTTGTGAAATATGCAAGCATCCGATGGAGAAGTATATCGTCTATGATGTGGTGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253407.p1 GENE.S_Transcript_253407~~S_Transcript_253407.p1 ORF type:complete len:358 (+),score=49.65,SEO_C|PF14577.2|2.2e-65 S_Transcript_253407:497-1570(+)
MLISRPELLTVDEWLFLVHQTYDHPLHDQLDGEYDILWMPISPSEKWSNKEVKIFNFLSNSLPWYSIQQPWSLSSITIKYAKEEWQFKEKPIMVVLDFIGRVTNVNASDMVSIWGAKAYPFSTTREKELWKEEKWNLPLLFGTIDPLLTMWVEEGRTICIYGSNKLDWVREFTEKIKDIQYLVSKFEIVYVGKKDRDELAKIVSVIDKEKLSHSLSLNKIYFFWRRLESIRRSKLRLGVGQSTDTEQILKQIETLLATSSAGTAEDWAIIATGSSTNMVKLQGKEGDKFLGQFPKCQKYMAKVGLEDAIRLCLEPPATKPCSHSRIIKYNERPIEGTSLCEICKHPMEKYIVYDVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST