Transcript Information: S_Transcript_253410.p1


Annotated TAIR IDAT1G67790.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25417542-25420099 | Reverse length=576
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43867584453594
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.11717247426996
Replicate 20.12292224527322
Replicate 30.23424008357122
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.13858266156657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253410.p1 GENE.S_Transcript_253410~~S_Transcript_253410.p1 ORF type:5prime_partial len:182 (-),score=19.94,SEO_N|PF14576.2|1.9e-44 S_Transcript_253410:3731-4276(-)
TTGCTAACATTCACGAAGAATCGTTTCAGAGTGGCTGATGTCGATTATGGATTATGGCAGATACTCTCGGAGTGCTATGGAGAGAAAAATGTGTATGCAAGTACAATGTCTGTGTTGAATTTACTCGGAAACTACAGATGGGAAGCTAAAATGCTTTTAGCACTTTCAGCTTTTGCTATAGCATACGGTGAAATGTGGGTCATCACACAGTTACAGAACCAGAATTCATTAGCTGCAGCAATTTCATTACTTAAAAGATTTCCCAGCAACATCGAAACATTCAACCCTATCTTTACAGCACTGAAACAGTTTGTTAAAACTGCATTAGATGTGATCAGGTGTGTCAAGCAATTCGAATGTCTACCAGTCACTCATGCAGAACTGCCAGATGAAACTATCACCTGCACAAAATCATTAATATATTCTGCAGCTTACTGGGTTGTCAGAAGCATTATGGTGTGCATTTCTCTCATCAGAAATATGAGAGCCATCGAAGATGAGCAAGTGCTTGTTCTTTACCTTCAGTTTTGCAGTTTCTTTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253410.p1 GENE.S_Transcript_253410~~S_Transcript_253410.p1 ORF type:5prime_partial len:182 (-),score=19.94,SEO_N|PF14576.2|1.9e-44 S_Transcript_253410:3731-4276(-)
LLTFTKNRFRVADVDYGLWQILSECYGEKNVYASTMSVLNLLGNYRWEAKMLLALSAFAIAYGEMWVITQLQNQNSLAAAISLLKRFPSNIETFNPIFTALKQFVKTALDVIRCVKQFECLPVTHAELPDETITCTKSLIYSAAYWVVRSIMVCISLIRNMRAIEDEQVLVLYLQFCSFFS*

Click here to download the sequence:
Link to NCBI Protein BLAST