Transcript Information: S_Transcript_253491.p1


Annotated TAIR IDAT1G51580.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19125612-19128102 | Forward length=621
E-Value2E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7870799377526
Replicate 22.0020680179233
Replicate 30.76984197808133
Condition 2: 8 Hour
Replicate 10.81276442225008
Replicate 20.32481812907044
Replicate 30.1160572464881
Condition 3: 24 Hour
Replicate 12.6562743990378
Replicate 22.5501929541444
Replicate 31.6479012678479


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253491.p1 GENE.S_Transcript_253491~~S_Transcript_253491.p1 ORF type:complete len:551 (+),score=98.10,KH_1|PF00013.25|5.8e-13,KH_1|PF00013.25|3.7e-09,KH_1|PF00013.25|1.7e-13,KH_1|PF00013.25|7.1e-14,KH_3|PF13014.2|5.4e-09,KH_3|PF13014.2|3.2e-08,KH_3|PF13014.2|8.8e-11,KH_3|PF13014.2|1.6e-06,KH_2|PF07650.13|0.024,KH_2|PF07650.13|0.017,KH_2|PF07650.13|0.068,KH_2|PF07650.13|2.3,KH_4|PF13083.2|29,KH_4|PF13083.2|25,KH_4|PF13083.2|0.00023,KH_4|PF13083.2|10,KH_5|PF13184.2|1.3,KH_5|PF13184.2|1.9,KH_5|PF13184.2|0.0077,KH_5|PF13184.2|3.7e+02 S_Transcript_253491:319-1971(+)
ATGGAACCACCCTTCTCCTTCAAACGCCACCACCAGAACCACCACCACCCACCACCACCACCACCACAACTATCACAGCAACCAAGACCCTTACCTCCGGAAACCTTATTCAGAATCCTCTGCCCAGCCACCAAAGCCGGGGGCATAATCGGAAAAGGAGGCGCCGTAATCCGACAGCTCCGCGACGAAACCGGAGCACGTATTCGGATCATCGACGACTTCGTCCCCCCTCACTGCGAAGAGCGAGTCATTCTCATCGCCGCCCCGAGTTCCGACTCCGTAAACCCTAACTCCGGCGACGAGAATGGCGGTTTTTCTTCGGTGGCGCAAATGGCACTGGTTAGGGTTTTCGAGAGGATACTGAAGGTGGACGAGGAGAGGAGTGAGAGAAATGAAGAGAATGGGTTTAATGGAGGCGAAGTTAATGGCGGGATGGGCCAACACGTGGTTTGTAGGTTGTTGGCTCCTAGTCATCAAGTTGGGTGTGTTTTGGGAAGAGGTGGGAAAATTGTGGAGAAAATTAGGCAAGAGAGTGGTGCTAGGGTTAGGGTTTTGCCTAGAGAGGGTATTCCTTCTTGTGCTTCTCCTGGTGATGAACTCATTCAGGAACACCCCAAAGCAGATATGTTTCATGGAGCTAACAATCCTGCTCACACAGATGCTTTCCCTCAAAGAGGAACACATGCTTCAGATTTTCACTCCAGGGGTTACCCAACAGGGTCAGCTCCTGAAAATTTTGGACCTAACAATGGGATGGTTGTTGAAGAGGATGTAATCTTCAGATTGCTATGTCAAGCAGATAAAATTGGTAGTTTGATAGGAAAAGGTGGTTCCATAATACGAGCTATTCAAACTGAAACTGGCGCGTCGATCAAGATTGGTGATGCTATTGCACCTGATTCAGATGAGCGAATTGTAGTGATTTCGGCACGAGAGAACTTAGACCTAAAACGCTCACCTGCTCAGGATGCCGTCATTCGTGTGCATAACAGAGTAGCAGAGGTTGGATTTGAACCAGGTGCTGCCATTGTTGCTCGGCTTGTTGTCCCTCCACAGCAAATAGGTTGTTTATTGGGTAAAGGAGGCCACATTATTGCTGAGATGAGACGACTTACTGGTGCTAGTATTCGAATTTTTGGCAGGGAACATGGTTCGAAGTTGAATACCCCAAATGATGAAGTTGTGCAGGTCATTGGGAGCGTGCAGTCGGTGCAGGATGCTTTGTTTCAGATTACCAGTAGGCTTAGGGAAATTGTATTTCCACCAAGGCCACACATTTCACATGTTAGTGGTCCCCCTTACATGAATACCTTTCCAGAGTTTCCGTCTCCATTTCGGCCTAGACATGATCAAGCTTCCCCAGGTCACTATCATTCGCCAGCAGGATTCTCTCATAGCTATGACAACCGTTCAGCTGGTCAGGGGCAAGCCCATCCTTCTAGCTTAACACAGGGTACAGATAGAACTGGTGTAGCAAATAGTGAAAACGAGCGCCATCATTATGCAGGTGATAGAGCTTCTTATGGTCAGTTTGAGCAGCCACCATCTCCTAGAGCATGGCAACGCCAGGCAGTTAACAACGCAAATTCTACAAGATTTCCTGACACAGGGCCTGGGCCTTCTGGGATGGTTGCAACCAGTAGTGAAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253491.p1 GENE.S_Transcript_253491~~S_Transcript_253491.p1 ORF type:complete len:551 (+),score=98.10,KH_1|PF00013.25|5.8e-13,KH_1|PF00013.25|3.7e-09,KH_1|PF00013.25|1.7e-13,KH_1|PF00013.25|7.1e-14,KH_3|PF13014.2|5.4e-09,KH_3|PF13014.2|3.2e-08,KH_3|PF13014.2|8.8e-11,KH_3|PF13014.2|1.6e-06,KH_2|PF07650.13|0.024,KH_2|PF07650.13|0.017,KH_2|PF07650.13|0.068,KH_2|PF07650.13|2.3,KH_4|PF13083.2|29,KH_4|PF13083.2|25,KH_4|PF13083.2|0.00023,KH_4|PF13083.2|10,KH_5|PF13184.2|1.3,KH_5|PF13184.2|1.9,KH_5|PF13184.2|0.0077,KH_5|PF13184.2|3.7e+02 S_Transcript_253491:319-1971(+)
MEPPFSFKRHHQNHHHPPPPPPQLSQQPRPLPPETLFRILCPATKAGGIIGKGGAVIRQLRDETGARIRIIDDFVPPHCEERVILIAAPSSDSVNPNSGDENGGFSSVAQMALVRVFERILKVDEERSERNEENGFNGGEVNGGMGQHVVCRLLAPSHQVGCVLGRGGKIVEKIRQESGARVRVLPREGIPSCASPGDELIQEHPKADMFHGANNPAHTDAFPQRGTHASDFHSRGYPTGSAPENFGPNNGMVVEEDVIFRLLCQADKIGSLIGKGGSIIRAIQTETGASIKIGDAIAPDSDERIVVISARENLDLKRSPAQDAVIRVHNRVAEVGFEPGAAIVARLVVPPQQIGCLLGKGGHIIAEMRRLTGASIRIFGREHGSKLNTPNDEVVQVIGSVQSVQDALFQITSRLREIVFPPRPHISHVSGPPYMNTFPEFPSPFRPRHDQASPGHYHSPAGFSHSYDNRSAGQGQAHPSSLTQGTDRTGVANSENERHHYAGDRASYGQFEQPPSPRAWQRQAVNNANSTRFPDTGPGPSGMVATSSER*

Click here to download the sequence:
Link to NCBI Protein BLAST