Transcript Information: S_Transcript_253553.p1


Annotated TAIR IDAT1G34420.1
Annotated Gene Nameleucine-rich repeat transmembrane protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12584587-12587570 | Forward length=966
E-Value7E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60415439807447
Replicate 20.60102945446124
Replicate 30.23027252771806
Condition 2: 8 Hour
Replicate 11.3555299180016
Replicate 20.96496055426744
Replicate 31.5242887617637
Condition 3: 24 Hour
Replicate 11.1157999512789
Replicate 20.74602784984571
Replicate 31.0020108446981


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253553.p1 GENE.S_Transcript_253553~~S_Transcript_253553.p1 ORF type:3prime_partial len:881 (+),score=135.48,LRR_8|PF13855.2|0.13,LRR_8|PF13855.2|0.00018,LRR_8|PF13855.2|7.5e-08,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|3.4e-05,LRR_8|PF13855.2|0.0003,LRR_8|PF13855.2|0.05,LRR_8|PF13855.2|1.4e-07,LRR_8|PF13855.2|8.3e-07,LRR_4|PF12799.3|8.6e+03,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.57,LRR_4|PF12799.3|4e-06,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.41,LRR_4|PF12799.3|0.047,LRR_4|PF12799.3|57,Pkinase|PF00069.21|8.8e-17,Pkinase_Tyr|PF07714.13|4.1e-16,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|43,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|94,LRR_1|PF00560.29|5.3,LRR_1|PF00560.29|3,LRR_1|PF00560.29|16,LRR_1|PF00560.29|0.39,LRR_1|PF00560.29|3.8,LRR_1|PF00560.29|4.8,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|8.4e+03,LRR_1|PF00560.29|8.8e+02,LRR_1|PF00560.29|0.31,LRR_1|PF00560.29|7.6e+02,LRRNT_2|PF08263.8|2.3e-05 S_Transcript_253553:323-2962(+)
ATGAAAACAGGCATCGTCAGCTGTGTTCCTTCTATCTCCAATCTCTTCCATTTCACCATCATGGTCATTCTGTTCTTTGGTTCAGTTTCTTCTCAGCTATCTCCACAACAGAAATCTATTATGAGTAACCTCTCTGAGCTCCTACCTTCCCTTTCATGGAACCTCAGTTCAAATCCATGCTCATGGTCAGGTGTGACATGCAGCAACACTAGCTCCTCTGTTACTGGACTTTCCCTCTCCAACCTTGGCCTCACTAATTCCACTCACTTCTTACCTCAGGTATGCATGATTGACTCTTTAGAAGCTCTAGATGTCTCCAAAAATCATCTTTCTTCAATCCCTCATGATTTTCTGACAGTCTGTGGGAAACTTCAGAGGCTTAAACTGGTAAACTTTAGTTCCAATAATTTATATGGTCCTTTGCCCTCTTTTTCTAATGGTTTTAGCAAATTAGAGTCATTAGACTTGGCTTACAACTTCATGAGTGGAAGTGTTGGGATGCAGCTAGATGGGTTGGTGGGTCTTAAGAGCTTGAACCTTAGCTTTAATAACTTCACTGGGTCAGTTCCTGTAAGGCTCGGAAAATCCATGGCTTTGGAGCAACTTGAATTATCAGCCAACTCTTTTCAGGGACCAATACCAGAACAACTTGGTGATTACAAGAACCTGACATTTCTTGATCTTAGCTTTAATAATCTCACTGAAATTCTCCCTTCTGGAATTGGGCAGCTCCCCAAGCTGGAAATTTTAGTACTATCTCAAAACTCGCTTAGTGGAGACATCCCAGCCTTTATTTCCAGAATCACAACTCTACGGAGATTTGCAGCCTACCACAACAGTTTTAGCGGTCCAATTCCATTTGGGATTTCAAGGTTTCTGAAGAACTTGGACCTAAGCTACAACAACTTAGGCGGGTTAATACCGAATGATCTTCTCTCACAGCCAAATCTGCAAACAGTTGATCTTTCCTATAATAGGTTGGAAGGATCAATACCTGGTAATATTTCTCCAAGTTTGGTTAGGCTGAGACTGGGAAACAATTTACTTAATGGTTCCATTGAGCCAATCAATTTTAGTGAACTTCAGAACTTGGTCTACTTGGAACTGGAAAATAATTTCTTGAGTGGATCAATCCCCTCTGGTCTAGGTTTTTGCCAGAAGCTGAAATTGTTAAGCTTAGCTGAAAACAGATTCCATGGCGAATTGCCAGCGGAATTGAGTAATCTGAAACAGCTCCAAGTGTTGAATCTTCAGCTGAACAAATTTGTCGGGGAGATCCCTCATGAAATCACCAAGCTATCCCACCTGTCAACCCTGAATATTAGTTACAATTCTCTGAACAGTACGATTCCTAATTCGATCTCAAGCTTGAAAAACCTTCAATATTTACATTTGCAAGAGAACAATCTCAGCGGTTTGATACCCAGAGATATTGGTGACTTGAATTACCTTATTGAACTCCAACTTGGGAAGAATCATCTTAGTGGGTACATTCCCCCCATGCCTGCAAACTTACAGTATGCTCTGAACCTCAGCAGCAATCTTTTTGAAGGTCAAATCCCTGTGACACTTTCTCAGCTAACTTCTCTGGAGATTTTGGATCTGTCCAACAACAGATTTTCTGGTCAGATTCCAAAATCTCTGATTGAGATGCAAAGCTTAACAATGCTGTTGCTTGATAACAACAATCTCTCTGGAGTCATTCCTCCCCTTAATGGCCATCTCCTGGCCGACTTCAAAGGAAATCCTTTCCTAATAGAACAACCAATAGGCTCAGGCACCAATTACTCTGTGTTGTCTCACAAGAAAATTTCAGTTGCAACCATAATTGGAGTGGTGGTTGCTGCAGTTTTTGTTGGTGGCCTGGTTGCAGTCATTGCAGTATGTCTCTCAAGGCGATTACTACAAAGGGTTAACGATCTTGAAATCCAGTCCAGAGATATGGACGTGCATCTCCCTAAGGCCACAGAAAGTCACTTGTTGACAACAAACATCATTCACAAATCAGGTATTGATTTCACCAAAGCCATGGAATCAATGGCTAACCCATTACACCTTGTGCTGAAGACTAAGTATACTAGCTACTACAAGGTTAGCATGCCCTCTGGACGAAGCTACTTTGTGAAGAAGCTCAACTTGGGTGACAGGTTATGTCAAAGCACCCATAAAAGTTTCAGGCAGGAGCTAGAGGCTTTAGGGAGGATGAATTGTACGAACATCATGACTCCTTTGGCTTACATGTTGGCAGCAGATATTCCTTACCTTTTCTATGAAATGACATTTAGGGGCACCTTATTTGATGTTCTCCATGGCAGTTCGAGGATTCCTTTAGATTGGGCAAGTCGGTGTAGTATTGCGGTTGGGGTAGCTCAAGGACTCGCTTCTCTCCATGGACGTGCATCTGGCCCGATTCTGCTTTTTGATCTTACAAGCAAAACAATTATGCTCAAATCATTGAAGGAACCCCAGATTGGGGACATTGAACTTTGTAAGGTGATTGACCCTTCAAAGAGCACTAGCAGCCTGTCAGCTGTAGCTGGTTCTGTTGGCTATATTCCACCAGAATATGCATACACAATGAGGGTTACAACGGCGGGCAATGTTTATAGCTTTGGGGTGATTCTGCTGGAGCTGCTAACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253553.p1 GENE.S_Transcript_253553~~S_Transcript_253553.p1 ORF type:3prime_partial len:881 (+),score=135.48,LRR_8|PF13855.2|0.13,LRR_8|PF13855.2|0.00018,LRR_8|PF13855.2|7.5e-08,LRR_8|PF13855.2|0.0026,LRR_8|PF13855.2|3.4e-05,LRR_8|PF13855.2|0.0003,LRR_8|PF13855.2|0.05,LRR_8|PF13855.2|1.4e-07,LRR_8|PF13855.2|8.3e-07,LRR_4|PF12799.3|8.6e+03,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.57,LRR_4|PF12799.3|4e-06,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.41,LRR_4|PF12799.3|0.047,LRR_4|PF12799.3|57,Pkinase|PF00069.21|8.8e-17,Pkinase_Tyr|PF07714.13|4.1e-16,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|43,LRR_1|PF00560.29|6.9e+02,LRR_1|PF00560.29|94,LRR_1|PF00560.29|5.3,LRR_1|PF00560.29|3,LRR_1|PF00560.29|16,LRR_1|PF00560.29|0.39,LRR_1|PF00560.29|3.8,LRR_1|PF00560.29|4.8,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|1e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6,LRR_1|PF00560.29|8.4e+03,LRR_1|PF00560.29|8.8e+02,LRR_1|PF00560.29|0.31,LRR_1|PF00560.29|7.6e+02,LRRNT_2|PF08263.8|2.3e-05 S_Transcript_253553:323-2962(+)
MKTGIVSCVPSISNLFHFTIMVILFFGSVSSQLSPQQKSIMSNLSELLPSLSWNLSSNPCSWSGVTCSNTSSSVTGLSLSNLGLTNSTHFLPQVCMIDSLEALDVSKNHLSSIPHDFLTVCGKLQRLKLVNFSSNNLYGPLPSFSNGFSKLESLDLAYNFMSGSVGMQLDGLVGLKSLNLSFNNFTGSVPVRLGKSMALEQLELSANSFQGPIPEQLGDYKNLTFLDLSFNNLTEILPSGIGQLPKLEILVLSQNSLSGDIPAFISRITTLRRFAAYHNSFSGPIPFGISRFLKNLDLSYNNLGGLIPNDLLSQPNLQTVDLSYNRLEGSIPGNISPSLVRLRLGNNLLNGSIEPINFSELQNLVYLELENNFLSGSIPSGLGFCQKLKLLSLAENRFHGELPAELSNLKQLQVLNLQLNKFVGEIPHEITKLSHLSTLNISYNSLNSTIPNSISSLKNLQYLHLQENNLSGLIPRDIGDLNYLIELQLGKNHLSGYIPPMPANLQYALNLSSNLFEGQIPVTLSQLTSLEILDLSNNRFSGQIPKSLIEMQSLTMLLLDNNNLSGVIPPLNGHLLADFKGNPFLIEQPIGSGTNYSVLSHKKISVATIIGVVVAAVFVGGLVAVIAVCLSRRLLQRVNDLEIQSRDMDVHLPKATESHLLTTNIIHKSGIDFTKAMESMANPLHLVLKTKYTSYYKVSMPSGRSYFVKKLNLGDRLCQSTHKSFRQELEALGRMNCTNIMTPLAYMLAADIPYLFYEMTFRGTLFDVLHGSSRIPLDWASRCSIAVGVAQGLASLHGRASGPILLFDLTSKTIMLKSLKEPQIGDIELCKVIDPSKSTSSLSAVAGSVGYIPPEYAYTMRVTTAGNVYSFGVILLELLT

Click here to download the sequence:
Link to NCBI Protein BLAST