Transcript Information: S_Transcript_253610.p1


Annotated TAIR IDAT1G22060.1
Annotated Gene NameLOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: FBD, F-box and Leucine Rich Repeat domains containing protein (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714 proteins in 2257 species: Archae - 1436; Bacteria - 11314; Metazoa - 40747; Fungi - 7706; Plants - 4675; Viruses - 308; Other Eukaryotes - 18553 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7773373-7780586 | Reverse length=1999
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3265398924562
Replicate 20.94748176013867
Replicate 31.0183105813031
Condition 2: 8 Hour
Replicate 11.7007980007529
Replicate 20.68625302575849
Replicate 30.91540449837343
Condition 3: 24 Hour
Replicate 11.2061592111371
Replicate 21.1123343104956
Replicate 30.46420940622913


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253610.p1 GENE.S_Transcript_253610~~S_Transcript_253610.p1 ORF type:internal len:163 (+),score=48.17 S_Transcript_253610:3-488(+)
CGCCAACTCACGAAAGAGAAGGAAGATCTTCTGAACGAATGTGATTTTGCTCAAGTCTCTTCAGCAACTGCCAAATCTGAAGTAGAGATTTTGAAACAGAAATTTCAAAGTGATGTACCAGAGGTGGTTAATAAATTGAACTTGTCCAGTGCTCTTGTCGAGAAGCTTCAAGCAGATCTTGAGCTTGTTGGTAACAAACTGAAGGTTAGCTCAGACGCAGAGGAAGAATATACACGGAGGACAGAAGATCTTTTGGTTGATTTTGCAAAAATGGAGGCTGCCTTACAGGAGCTCACTACCAGGAATAGGGATCTTGCTGATGAAATAATGTGTTTAGGAAGTGTTACTGATGAGATAGAACAAAATAAATTGAATATGGATAAAATAACAAAGGAAAACCTCAACTTCATGCCGCTTTTGCAGAGTAAGACTGATGAATCTGACAAGCTCACATTGGAGCTTAATAATTTACAAGGAACTGTGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253610.p1 GENE.S_Transcript_253610~~S_Transcript_253610.p1 ORF type:internal len:163 (+),score=48.17 S_Transcript_253610:3-488(+)
RQLTKEKEDLLNECDFAQVSSATAKSEVEILKQKFQSDVPEVVNKLNLSSALVEKLQADLELVGNKLKVSSDAEEEYTRRTEDLLVDFAKMEAALQELTTRNRDLADEIMCLGSVTDEIEQNKLNMDKITKENLNFMPLLQSKTDESDKLTLELNNLQGTVG

Click here to download the sequence:
Link to NCBI Protein BLAST