Transcript Information: S_Transcript_253669.p1


Annotated TAIR IDAT3G51850.1
Annotated Gene Namecalcium-dependent protein kinase 13
Annotated Gene Symbol(s)CPK13
Annotation TypeOrtholog
Chromosome Positionchr3:19232667-19235526 | Forward length=528
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.719281044447
Replicate 219.757721991804
Replicate 321.092158991133
Condition 2: 8 Hour
Replicate 129.322411686058
Replicate 230.260429596645
Replicate 334.876862592479
Condition 3: 24 Hour
Replicate 113.000966107275
Replicate 217.420690987789
Replicate 320.469383052659


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253669.p1 GENE.S_Transcript_253669~~S_Transcript_253669.p1 ORF type:complete len:536 (+),score=107.18,Pkinase|PF00069.21|1.4e-73,EF-hand_1|PF00036.28|1.7e-05,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|3.7e-07,EF-hand_1|PF00036.28|1.9e-09,Pkinase_Tyr|PF07714.13|3.1e-25,EF-hand_7|PF13499.2|1.1e-08,EF-hand_7|PF13499.2|1.1e-12,EF-hand_6|PF13405.2|0.00038,EF-hand_6|PF13405.2|12,EF-hand_6|PF13405.2|4.5e-07,EF-hand_6|PF13405.2|5.9e-06,EF-hand_5|PF13202.2|1.4e-05,EF-hand_5|PF13202.2|45,EF-hand_5|PF13202.2|1.1e-05,EF-hand_5|PF13202.2|7.3e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|2.9e-06,EF-hand_8|PF13833.2|4.8,EF-hand_8|PF13833.2|4.7e-08 S_Transcript_253669:246-1853(+)
ATGGGGAATTGTTGCAGATCTCCAGCCGCAGTAGCAAGAGAAGACGTAAAATCGAAGAACTCAGAAAATCGAAGGAAAGAGAAACAGAAACATCACAATCATTCAACCACAAAAAAATCAACGACAGCAACATCTTCGATCACCGTCTTACCTGACGTGCCAAAAGAATCGATCGAAGAGAAGTATTTAGTGGATAGAGAGTTAGGGCGAGGCGAATTCGGAGTAACCTACCTTTGTATCGACAAAACCTCAAGAGAGCTACTCGCATGTAAGTCGATTTCAAAGCGAAAGCTCCGTACAGCAGTGGATATAGAAGATGTGAGGAGAGAAGTAGCGATAATGAAGCATTTGCCAAAGAGCTCGAGTATAGTGAGCTTGAAGGAAGCTTGTGAGGATGAGAATTCGGTGCATTTGGTGATGGAGTTGTGTGAAGGAGGAGAGCTGTTTGATCGGATCGTGGCGAGAGGTCACTATACTGAAAGAGCAGCAGCTGCTGTTACTAGAACTATTGTGGAAGTGGTTCAGCTTTGTCATAAGCATGGTGTTATTCATAGGGATTTGAAACCTGAGAACTTTTTGTTCGCTAATAAGAAGGAGAATTCGCCCTTGAAAGCCATTGATTTTGGCCTTTCTATCTTCTTTAAGCCTGGTGAACGGTTCTCTGAGATTGTCGGAAGTCCGTATTATATGGCCCCAGAGGTCCTAAAGCGAAATTATGGACCTGAAATTGATATATGGAGTGCCGGAGTTATTCTGTATATATTATTATGTGGAGTTCCTCCATTTTGGGCAGAGTCCGAGCAAGGGGTGGCACAGGCTATTTTACGTGGCATTATTGATTTCAAACGGGATCCATGGCCTAATGTTTCAGAGAGTGCAAAGAGTTTGGTTCGACTAATGTTGGAGCCAGATCCAAAGAAAAGACTAACAGCAAAACAAGTACTTGAGCATCCTTGGCTACAGAATGCCAAGAAGGCTCCAAACGTGCCACTTGGAGATGTTGTAAAATCAAGGCTCAAGCAATTCTCAATGATGAACAGATTCAAGAGGAAAGCTTTGAGGGTTATTGCCGAGTTCTTGTCTGTTGAAGAAGTTGAAGACATTAAGGAAATGTTCAAGAAGATAGACACAGATGATGATGGAATCATTACAGTTGAAGAACTTAAAACTGGTCGCTTAAAGTTTGGGTCCCCTCTTGCAGAGTCTGAAGTACAAATGCTCATTGAAGCTGTTGACACAAGTGGGAAAGGAACTTTAGACTATGGAGAATTTCTTGCTGTTTCTCTCCATTTACAGAGAATGGCAAATGATGAGCACCTTCGGAAGGCCTTCTCCTACTTTGACAAGGATGGAAACGGTTTTATTGAACCAGAAGAACTCCAAAATGCCTTGATGGAAGATGGGGTTGATGATTGCATTAACGTTGCCAATGACATTTTCCAAGAGGTGGACACGGATAAGGATGGGAAAATCAGCTACGATGAATTTGTTGCAATGATGAAAACTGGAACTGACTGGAGAAAGGCATCTAGACATTATTCGAGAGGTAGATTTAACAGCCTGAGCATAAAGCTAATGAAGGATGGTTCATTGAACTTGGGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253669.p1 GENE.S_Transcript_253669~~S_Transcript_253669.p1 ORF type:complete len:536 (+),score=107.18,Pkinase|PF00069.21|1.4e-73,EF-hand_1|PF00036.28|1.7e-05,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|3.7e-07,EF-hand_1|PF00036.28|1.9e-09,Pkinase_Tyr|PF07714.13|3.1e-25,EF-hand_7|PF13499.2|1.1e-08,EF-hand_7|PF13499.2|1.1e-12,EF-hand_6|PF13405.2|0.00038,EF-hand_6|PF13405.2|12,EF-hand_6|PF13405.2|4.5e-07,EF-hand_6|PF13405.2|5.9e-06,EF-hand_5|PF13202.2|1.4e-05,EF-hand_5|PF13202.2|45,EF-hand_5|PF13202.2|1.1e-05,EF-hand_5|PF13202.2|7.3e-07,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|2.9e-06,EF-hand_8|PF13833.2|4.8,EF-hand_8|PF13833.2|4.7e-08 S_Transcript_253669:246-1853(+)
MGNCCRSPAAVAREDVKSKNSENRRKEKQKHHNHSTTKKSTTATSSITVLPDVPKESIEEKYLVDRELGRGEFGVTYLCIDKTSRELLACKSISKRKLRTAVDIEDVRREVAIMKHLPKSSSIVSLKEACEDENSVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGIIDFKRDPWPNVSESAKSLVRLMLEPDPKKRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDTDDDGIITVEELKTGRLKFGSPLAESEVQMLIEAVDTSGKGTLDYGEFLAVSLHLQRMANDEHLRKAFSYFDKDGNGFIEPEELQNALMEDGVDDCINVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST