Transcript Information: S_Transcript_253759.p1


Annotated TAIR IDAT5G01630.1
Annotated Gene NameBRCA2-like B
Annotated Gene Symbol(s)BRCA2B, BRCA2(V), ATBRCA2(V)
Annotation TypeOrtholog
Chromosome Positionchr5:235117-240911 | Reverse length=1155
E-Value1.3e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1473271385364
Replicate 20.84777354438436
Replicate 30.58767856311379
Condition 2: 8 Hour
Replicate 11.0992469235636
Replicate 21.0064186829493
Replicate 31.7180533214887
Condition 3: 24 Hour
Replicate 10.3275708864569
Replicate 20.74342399734973
Replicate 30.66187183068721


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_253759.p1 GENE.S_Transcript_253759~~S_Transcript_253759.p1 ORF type:complete len:1067 (+),score=207.54,BRCA-2_OB1|PF09103.6|1e-35,BRCA2|PF00634.14|2.1,BRCA2|PF00634.14|1.8e-08,BRCA2|PF00634.14|1.4e-09,BRCA-2_helical|PF09169.6|4.5e-19 S_Transcript_253759:307-3507(+)
ATGATTCTGGAGGAGGATTGCGAAACGCCAAATGTTGATAAAATTCCTGTGTTTCGAACTGGATTGGGGAACTCCGTTGTGTTGAAATCATCTTCAATTGCTAAAGCTTCTTCTGTTCTTGGCGTTGATTATAGCCTCATTGACACTGGTCAGTCATGTATTACACGAAGTGGTTTCACTTCTCCTAATTCTATGTTCCAAACGGGGAGTGGGAAGAAGGTCAGTGTTTCTTCTGCAGGACTTCTCAGAGCCAAAGCATTGTTGGGACTGAATGAAAGTAATGATGAGTTTGATATTCAAGGCTTCAAACCTGCAATTAAGAAATTTAGTGGCAATGATAGTTATGCACCTGAGAAACGGTTCAAGGAGGTGGTGTTGAATGGTGTGGGAAATGAGACTAGTTCAGTGCTCACTAAGGTTCCACCTCTTTTTAAGACTAATTTGACAGGAAATGAATTTGTTGGCGAGAACATTGGCAAAATTTTAGAACCAAAAAGTTGTAGCTCCTCTAGTAAACCGCCTCCGATTAAGTTCCATACTGCTGGTGGCAGATCAATTTCAGTATCTAGTGATGCATTGCAGCGTGCGAGAAGCCTTCTTGGTGATCCAGAGATGGGCAACTTTTTAGATGAGGGTGATGCAGGTGCTTCCATGTCTTCATTTTTTAATAAGGATACTTTGGATGTAAAGTCCTTCAATTCAGATGGGAATTTTTTCAAAAGTGTGAAACATACTAATTCTTCTCTGACACATCATCAACAAGAAATGAGTGAACAAAATCCCAAGGTATTTGTATCACCAATGCGCTCATCTGTTAACAGAGAACACTCAGAAGCCAAATCAGACATTATGCTTTCAGGGACCAATTTGCTCTCGAAATTTGATGCAGAGGAAAGGATCTCTAAAACAACCACTGATACATCCTGTCTGAAAAAGCCTTTCCACGAGCCTGATAGATTAACACAGTTCTCTGATTCAAATGGTTTGTGTTCGAGCATCCATAGACCAAAAAGGTCACTAGGGGGCCCACTTGCTGATATTACAAACATCACAGGCATTGATTTAGCAAGCAAAAAAGGAGCAACTACTGAGCTAAGGAGACTTGGGAAAAGGAGTTCTGTTTCTCCATTCAAAAGGCCACGGAACGCAAAATTCATTACCCCTTTAAACTCCAACCTTTCATGTGCTCCTGATGGATTCGTCAACAGGGTATCTGAAGCTTCGCATTCCAGAAAAAGGGTATCTACTCATTACCCATTTCAAAATTTAAGACCATATACCAAAGACTTCTTCAAAGTGCCTCCAAAACACCCAAAAGAGCTGAAGCATCTTCCAGACCAAGTACAATTGATAAGTCCTGTCAACTCAGGGAAGTACATGTTTTCTGATGGATCCCAGTTTGTCGGTGTTGAAGCTTTCCACGATATGCTGGCTCAATCTGGAGCTTCCATGCAACATGCAACAAAACAATGGGTAGCAAATCACTACAAGTGGATTGTGTGGAAACTTGCTAGTTATGAGAGATGCTATTCGGCTAAATTTACGAAGAAATTTCTCACTATTTCTAATGTGCTAGATGAACTGAAGTACAGATATGAACGTGAAATTAATCATGGTCAACGTTCTTCAATTAAGAAAATTTTGGAAGGAGATGCAGCACCATCTTCCATGCTGGTTCTATGTGTTTCAGCTATTCGTTCTGCTTCTGAGATTGGGACTCCCAGTACAAGTGGAGTTGAGATGAGTAGCAGTGCCAGTGCCAGACTAGAACTTACTGATGGGTGGTACTCTATAGATGCACAGTTGGATGTGCTTCTCTCAAAGCATCTTACTGCTGGAAAAGTATTCGTGGGGCAAAAACTACAGATCTGTGGAGCGGGTTTAAATGGCTGGGATGGTCCTGTGTCTCCTCTTGAGGCTTCACCTTCAATTAGTTTATTGTTGCACATAAATGGAACTTATAGAGCAGGCTGGGCAGAGCGTTTAGGATTCTGTAAAGGTGCATGCCCTCCGTTGGCATTTCGGTGTGTTAAGAGTAATGGGGGTCCAATTCCTAGGACCCTAGTTGGAATTACGAGGATATATCCTGTCCTTTATAGAGAAAGGTTGAGGAGTGGGGATTATATTGTGAGGTCAGAGAAGACAGAGGCTGCATTTTCACAGCTTTATAACCAGAGACGCTCTGACATCATAGAGGGAGTTGCATCTGACTTTCAGAGAGGCAGTAGTAGTTCCTGTAACCCAAATGACTATGATAATGAAGAGGGAGCAAGGATTCTGAAGATGCTTGAGAGTGCTGCTGAACCAGAATTGTTGATGGCAGAAATGAGTTCTGAGCAGCTATCATCCTTTTCCATGTATCGAGCAAAAGTAGAGGCTAGCAGGCAGTTTGACTTGCAGAGATTGATCGAGAAAGAACTTGAAGAAGCAGGGTTGAGTGCCAGAGAAGTCACCCCATTTATGCGAGTTAGGGTTGTTGGGCTAAAAAGTGATGGCCCAGCTGAAGCTAAAGACCCTAGGGAAGGCTTAATTACAATATGGAATCCTACAGAGAGGCAGCAACTTGAGCTGTCAGAAGGTCAGGCGTATGCTATTTCAGGCCTCATACCATTGCATTCAGATCTCAATCTGCTTTATCTACAAGCGAGAGGATCTAACTCTAAATGGCAGCCTTTAAGTACTAAAGAGCAGGAATCTTTTGTGCCATTCTTCAAACCTCGCAAACCAGTATCATTATCAAGAATAGGGGAAATTCCTCTATCCAGTGAATTTGATACCGCTGTGTTGATTTTACACGTTGGGCTGGAATATATAGTTGGCCAGCAAAAGAAACAGTGGGTGTTTGTCGCTGATGGATCCTTATGCAAGTTACAACCAGAAGAATCAACAAAGTCCTTGCTAGCAATTAGTTTCTCTTCGCTACGCACTGAGGATGATTCAATATCTCCCATCAACCATAACCTCATTGGCTCCATAGTTGGCTTCTGCAATCTAGTGAAGAGAACCAAGGATCACATGAATAATATGTGGGTTGCAGAAGCAACTGAAAACACTACATATTACCTTAACAATGATTATTGTGGTTGTTCCCATCTCAAAGATGCTTTTGCCTTTGTGAAGAAATGGCAGCAAAGTTCCAACTTGATTATTGAGAATCTCAAGGAGAAGGTGCTGCATCTAGTTGGTGGTTCTAAAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_253759.p1 GENE.S_Transcript_253759~~S_Transcript_253759.p1 ORF type:complete len:1067 (+),score=207.54,BRCA-2_OB1|PF09103.6|1e-35,BRCA2|PF00634.14|2.1,BRCA2|PF00634.14|1.8e-08,BRCA2|PF00634.14|1.4e-09,BRCA-2_helical|PF09169.6|4.5e-19 S_Transcript_253759:307-3507(+)
MILEEDCETPNVDKIPVFRTGLGNSVVLKSSSIAKASSVLGVDYSLIDTGQSCITRSGFTSPNSMFQTGSGKKVSVSSAGLLRAKALLGLNESNDEFDIQGFKPAIKKFSGNDSYAPEKRFKEVVLNGVGNETSSVLTKVPPLFKTNLTGNEFVGENIGKILEPKSCSSSSKPPPIKFHTAGGRSISVSSDALQRARSLLGDPEMGNFLDEGDAGASMSSFFNKDTLDVKSFNSDGNFFKSVKHTNSSLTHHQQEMSEQNPKVFVSPMRSSVNREHSEAKSDIMLSGTNLLSKFDAEERISKTTTDTSCLKKPFHEPDRLTQFSDSNGLCSSIHRPKRSLGGPLADITNITGIDLASKKGATTELRRLGKRSSVSPFKRPRNAKFITPLNSNLSCAPDGFVNRVSEASHSRKRVSTHYPFQNLRPYTKDFFKVPPKHPKELKHLPDQVQLISPVNSGKYMFSDGSQFVGVEAFHDMLAQSGASMQHATKQWVANHYKWIVWKLASYERCYSAKFTKKFLTISNVLDELKYRYEREINHGQRSSIKKILEGDAAPSSMLVLCVSAIRSASEIGTPSTSGVEMSSSASARLELTDGWYSIDAQLDVLLSKHLTAGKVFVGQKLQICGAGLNGWDGPVSPLEASPSISLLLHINGTYRAGWAERLGFCKGACPPLAFRCVKSNGGPIPRTLVGITRIYPVLYRERLRSGDYIVRSEKTEAAFSQLYNQRRSDIIEGVASDFQRGSSSSCNPNDYDNEEGARILKMLESAAEPELLMAEMSSEQLSSFSMYRAKVEASRQFDLQRLIEKELEEAGLSAREVTPFMRVRVVGLKSDGPAEAKDPREGLITIWNPTERQQLELSEGQAYAISGLIPLHSDLNLLYLQARGSNSKWQPLSTKEQESFVPFFKPRKPVSLSRIGEIPLSSEFDTAVLILHVGLEYIVGQQKKQWVFVADGSLCKLQPEESTKSLLAISFSSLRTEDDSISPINHNLIGSIVGFCNLVKRTKDHMNNMWVAEATENTTYYLNNDYCGCSHLKDAFAFVKKWQQSSNLIIENLKEKVLHLVGGSKG*

Click here to download the sequence:
Link to NCBI Protein BLAST